LAMMPS (7 Jan 2022) using 1 OpenMP thread(s) per MPI task log 2.1_Initialize.out #------------------------------------------------------------------------------- # Stage 2.1: Initialize LAMMPS run for layer perpendicular to Z #------------------------------------------------------------------------------- units real boundary p p s atom_style full pair_style lj/class2/coul/cut 12 bond_style class2 angle_style class2 dihedral_style class2 improper_style class2 special_bonds lj 0.0 0.0 1.0 coul 0.0 0.0 1.0 box tilt large read_data structure.dat Reading data file ... orthogonal box = (0 0 1.017707) to (40.41406 40.41406 39.890676) 2 by 2 by 2 MPI processor grid reading atoms ... 6600 atoms scanning bonds ... 1 = max bonds/atom scanning angles ... 1 = max angles/atom reading bonds ... 4400 bonds reading angles ... 2200 angles Finding 1-2 1-3 1-4 neighbors ... special bond factors lj: 0 0 1 special bond factors coul: 0 0 1 2 = max # of 1-2 neighbors 1 = max # of 1-3 neighbors 2 = max # of special neighbors special bonds CPU = 0.001 seconds read_data CPU = 0.037 seconds include parameters.dat bond_coeff 1 0.97 563.28 -1428.2 1902.1 # h* o* angle_coeff 1 103.7 49.84 -11.6 -8 # h* o* h* dihedral_coeff 1 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 # xxx xxx xxx xxx improper_coeff 1 0.0 0.0 # xxx xxx xxx xxx angle_coeff 1 bb -9.5 0.97 0.97 # h* o* h* angle_coeff 1 ba 22.35 22.35 0.97 0.97 # h* o* h* dihedral_coeff 1 mbt 0.0000 0.0000 0.0000 0.0 # xxx xxx xxx xxx dihedral_coeff 1 ebt 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0 0.0 # xxx xxx xxx xxx dihedral_coeff 1 at 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0 0.0 # xxx xxx xxx xxx dihedral_coeff 1 aat 0.0000 0.0 0.0 # xxx xxx xxx xxx dihedral_coeff 1 bb13 0.0 0.0 0.0 # xxx xxx xxx xxx improper_coeff 1 aa 0.0 0.0 0.0 120.0 120.0 120.0 # xxx xxx xxx xxx pair_coeff 1 1 0 1.098 # hw - pair_coeff 2 2 0.148 3.7824 # o* - neighbor 2.0 bin neigh_modify delay 0 every 1 check yes variable R equal 0.00198722 variable sysvol equal vol variable sysmass equal mass(all)/6.0221367e+23 variable sysdensity equal v_sysmass/v_sysvol/1.0e-24 variable coulomb equal ecoul+elong variable etotal equal etotal variable pe equal pe variable ke equal ke variable evdwl equal evdwl variable epair equal epair variable ebond equal ebond variable eangle equal eangle variable edihed equal edihed variable eimp equal eimp variable lx equal lx variable ly equal ly variable lz equal lz variable Nthermo equal 0 variable cella equal lx variable cellb equal sqrt(ly*ly+xy*xy) variable cellc equal sqrt(lz*lz+xz*xz+yz*yz) variable cellalpha equal acos((xy*xz+ly*yz)/(v_cellb*v_cellc)) variable cellbeta equal acos(xz/v_cellc) variable cellgamma equal acos(xy/v_cellb) variable p equal press variable pxx equal pxx variable pyy equal pyy variable pzz equal pzz variable pyz equal pyz variable pxz equal pxz variable pxy equal pxy variable sxx equal -pxx variable syy equal -pyy variable szz equal -pzz variable syz equal -pyz variable sxz equal -pxz variable sxy equal -pxy variable fmax equal fmax variable fnorm equal fnorm variable time equal step*dt+0.000001 variable surfacetension equal 0.5*v_lz*(0.5*(v_sxx+v_syy)-v_szz) thermo_style custom step v_time press vol v_sysdensity temp ebond eangle edihed eimp evdwl ecoul etail elong pe ke thermo_modify flush yes # # Set up the fixed and movable groups # group movable union all 6600 atoms in group movable group fixed subtract all movable 0 atoms in group fixed compute sum_f1 movable reduce sum fx fy fz variable sum_fx equal c_sum_f1[1] variable sum_fy equal c_sum_f1[2] variable sum_fz equal c_sum_f1[3] # # Subsets # group subset_O(H2O) id 1 4 7 10 13 16 19 22 25 28 10 atoms in group subset_O(H2O) group subset_O(H2O) id 31 34 37 40 43 46 49 52 55 58 20 atoms in group subset_O(H2O) group subset_O(H2O) id 61 64 67 70 73 76 79 82 85 88 30 atoms in group subset_O(H2O) group subset_O(H2O) id 91 94 97 100 103 106 109 112 115 118 40 atoms in group subset_O(H2O) group subset_O(H2O) id 121 124 127 130 133 136 139 142 145 148 50 atoms in group subset_O(H2O) group subset_O(H2O) id 151 154 157 160 163 166 169 172 175 178 60 atoms in group subset_O(H2O) group subset_O(H2O) id 181 184 187 190 193 196 199 202 205 208 70 atoms in group subset_O(H2O) group subset_O(H2O) id 211 214 217 220 223 226 229 232 235 238 80 atoms in group subset_O(H2O) group subset_O(H2O) id 241 244 247 250 253 256 259 262 265 268 90 atoms in group subset_O(H2O) group subset_O(H2O) id 271 274 277 280 283 286 289 292 295 298 100 atoms in group subset_O(H2O) group subset_O(H2O) id 301 304 307 310 313 316 319 322 325 328 110 atoms in group subset_O(H2O) group subset_O(H2O) id 331 334 337 340 343 346 349 352 355 358 120 atoms in group subset_O(H2O) group subset_O(H2O) id 361 364 367 370 373 376 379 382 385 388 130 atoms in group subset_O(H2O) group subset_O(H2O) id 391 394 397 400 403 406 409 412 415 418 140 atoms in group subset_O(H2O) group subset_O(H2O) id 421 424 427 430 433 436 439 442 445 448 150 atoms in group subset_O(H2O) group subset_O(H2O) id 451 454 457 460 463 466 469 472 475 478 160 atoms in group subset_O(H2O) group subset_O(H2O) id 481 484 487 490 493 496 499 502 505 508 170 atoms in group subset_O(H2O) group subset_O(H2O) id 511 514 517 520 523 526 529 532 535 538 180 atoms in group subset_O(H2O) group subset_O(H2O) id 541 544 547 550 553 556 559 562 565 568 190 atoms in group subset_O(H2O) group subset_O(H2O) id 571 574 577 580 583 586 589 592 595 598 200 atoms in group subset_O(H2O) group subset_O(H2O) id 601 604 607 610 613 616 619 622 625 628 210 atoms in group subset_O(H2O) group subset_O(H2O) id 631 634 637 640 643 646 649 652 655 658 220 atoms in group subset_O(H2O) group subset_O(H2O) id 661 664 667 670 673 676 679 682 685 688 230 atoms in group subset_O(H2O) group subset_O(H2O) id 691 694 697 700 703 706 709 712 715 718 240 atoms in group subset_O(H2O) group subset_O(H2O) id 721 724 727 730 733 736 739 742 745 748 250 atoms in group subset_O(H2O) group subset_O(H2O) id 751 754 757 760 763 766 769 772 775 778 260 atoms in group subset_O(H2O) group subset_O(H2O) id 781 784 787 790 793 796 799 802 805 808 270 atoms in group subset_O(H2O) group subset_O(H2O) id 811 814 817 820 823 826 829 832 835 838 280 atoms in group subset_O(H2O) group subset_O(H2O) id 841 844 847 850 853 856 859 862 865 868 290 atoms in group subset_O(H2O) group subset_O(H2O) id 871 874 877 880 883 886 889 892 895 898 300 atoms in group subset_O(H2O) group subset_O(H2O) id 901 904 907 910 913 916 919 922 925 928 310 atoms in group subset_O(H2O) group subset_O(H2O) id 931 934 937 940 943 946 949 952 955 958 320 atoms in group subset_O(H2O) group subset_O(H2O) id 961 964 967 970 973 976 979 982 985 988 330 atoms in group subset_O(H2O) group subset_O(H2O) id 991 994 997 1000 1003 1006 1009 1012 1015 1018 340 atoms in group subset_O(H2O) group subset_O(H2O) id 1021 1024 1027 1030 1033 1036 1039 1042 1045 1048 350 atoms in group subset_O(H2O) group subset_O(H2O) id 1051 1054 1057 1060 1063 1066 1069 1072 1075 1078 360 atoms in group subset_O(H2O) group subset_O(H2O) id 1081 1084 1087 1090 1093 1096 1099 1102 1105 1108 370 atoms in group subset_O(H2O) group subset_O(H2O) id 1111 1114 1117 1120 1123 1126 1129 1132 1135 1138 380 atoms in group subset_O(H2O) group subset_O(H2O) id 1141 1144 1147 1150 1153 1156 1159 1162 1165 1168 390 atoms in group subset_O(H2O) group subset_O(H2O) id 1171 1174 1177 1180 1183 1186 1189 1192 1195 1198 400 atoms in group subset_O(H2O) group subset_O(H2O) id 1201 1204 1207 1210 1213 1216 1219 1222 1225 1228 410 atoms in group subset_O(H2O) group subset_O(H2O) id 1231 1234 1237 1240 1243 1246 1249 1252 1255 1258 420 atoms in group subset_O(H2O) group subset_O(H2O) id 1261 1264 1267 1270 1273 1276 1279 1282 1285 1288 430 atoms in group subset_O(H2O) group subset_O(H2O) id 1291 1294 1297 1300 1303 1306 1309 1312 1315 1318 440 atoms in group subset_O(H2O) group subset_O(H2O) id 1321 1324 1327 1330 1333 1336 1339 1342 1345 1348 450 atoms in group subset_O(H2O) group subset_O(H2O) id 1351 1354 1357 1360 1363 1366 1369 1372 1375 1378 460 atoms in group subset_O(H2O) group subset_O(H2O) id 1381 1384 1387 1390 1393 1396 1399 1402 1405 1408 470 atoms in group subset_O(H2O) group subset_O(H2O) id 1411 1414 1417 1420 1423 1426 1429 1432 1435 1438 480 atoms in group subset_O(H2O) group subset_O(H2O) id 1441 1444 1447 1450 1453 1456 1459 1462 1465 1468 490 atoms in group subset_O(H2O) group subset_O(H2O) id 1471 1474 1477 1480 1483 1486 1489 1492 1495 1498 500 atoms in group subset_O(H2O) group subset_O(H2O) id 1501 1504 1507 1510 1513 1516 1519 1522 1525 1528 510 atoms in group subset_O(H2O) group subset_O(H2O) id 1531 1534 1537 1540 1543 1546 1549 1552 1555 1558 520 atoms in group subset_O(H2O) group subset_O(H2O) id 1561 1564 1567 1570 1573 1576 1579 1582 1585 1588 530 atoms in group subset_O(H2O) group subset_O(H2O) id 1591 1594 1597 1600 1603 1606 1609 1612 1615 1618 540 atoms in group subset_O(H2O) group subset_O(H2O) id 1621 1624 1627 1630 1633 1636 1639 1642 1645 1648 550 atoms in group subset_O(H2O) group subset_O(H2O) id 1651 1654 1657 1660 1663 1666 1669 1672 1675 1678 560 atoms in group subset_O(H2O) group subset_O(H2O) id 1681 1684 1687 1690 1693 1696 1699 1702 1705 1708 570 atoms in group subset_O(H2O) group subset_O(H2O) id 1711 1714 1717 1720 1723 1726 1729 1732 1735 1738 580 atoms in group subset_O(H2O) group subset_O(H2O) id 1741 1744 1747 1750 1753 1756 1759 1762 1765 1768 590 atoms in group subset_O(H2O) group subset_O(H2O) id 1771 1774 1777 1780 1783 1786 1789 1792 1795 1798 600 atoms in group subset_O(H2O) group subset_O(H2O) id 1801 1804 1807 1810 1813 1816 1819 1822 1825 1828 610 atoms in group subset_O(H2O) group subset_O(H2O) id 1831 1834 1837 1840 1843 1846 1849 1852 1855 1858 620 atoms in group subset_O(H2O) group subset_O(H2O) id 1861 1864 1867 1870 1873 1876 1879 1882 1885 1888 630 atoms in group subset_O(H2O) group subset_O(H2O) id 1891 1894 1897 1900 1903 1906 1909 1912 1915 1918 640 atoms in group subset_O(H2O) group subset_O(H2O) id 1921 1924 1927 1930 1933 1936 1939 1942 1945 1948 650 atoms in group subset_O(H2O) group subset_O(H2O) id 1951 1954 1957 1960 1963 1966 1969 1972 1975 1978 660 atoms in group subset_O(H2O) group subset_O(H2O) id 1981 1984 1987 1990 1993 1996 1999 2002 2005 2008 670 atoms in group subset_O(H2O) group subset_O(H2O) id 2011 2014 2017 2020 2023 2026 2029 2032 2035 2038 680 atoms in group subset_O(H2O) group subset_O(H2O) id 2041 2044 2047 2050 2053 2056 2059 2062 2065 2068 690 atoms in group subset_O(H2O) group subset_O(H2O) id 2071 2074 2077 2080 2083 2086 2089 2092 2095 2098 700 atoms in group subset_O(H2O) group subset_O(H2O) id 2101 2104 2107 2110 2113 2116 2119 2122 2125 2128 710 atoms in group subset_O(H2O) group subset_O(H2O) id 2131 2134 2137 2140 2143 2146 2149 2152 2155 2158 720 atoms in group subset_O(H2O) group subset_O(H2O) id 2161 2164 2167 2170 2173 2176 2179 2182 2185 2188 730 atoms in group subset_O(H2O) group subset_O(H2O) id 2191 2194 2197 2200 2203 2206 2209 2212 2215 2218 740 atoms in group subset_O(H2O) group subset_O(H2O) id 2221 2224 2227 2230 2233 2236 2239 2242 2245 2248 750 atoms in group subset_O(H2O) group subset_O(H2O) id 2251 2254 2257 2260 2263 2266 2269 2272 2275 2278 760 atoms in group subset_O(H2O) group subset_O(H2O) id 2281 2284 2287 2290 2293 2296 2299 2302 2305 2308 770 atoms in group subset_O(H2O) group subset_O(H2O) id 2311 2314 2317 2320 2323 2326 2329 2332 2335 2338 780 atoms in group subset_O(H2O) group subset_O(H2O) id 2341 2344 2347 2350 2353 2356 2359 2362 2365 2368 790 atoms in group subset_O(H2O) group subset_O(H2O) id 2371 2374 2377 2380 2383 2386 2389 2392 2395 2398 800 atoms in group subset_O(H2O) group subset_O(H2O) id 2401 2404 2407 2410 2413 2416 2419 2422 2425 2428 810 atoms in group subset_O(H2O) group subset_O(H2O) id 2431 2434 2437 2440 2443 2446 2449 2452 2455 2458 820 atoms in group subset_O(H2O) group subset_O(H2O) id 2461 2464 2467 2470 2473 2476 2479 2482 2485 2488 830 atoms in group subset_O(H2O) group subset_O(H2O) id 2491 2494 2497 2500 2503 2506 2509 2512 2515 2518 840 atoms in group subset_O(H2O) group subset_O(H2O) id 2521 2524 2527 2530 2533 2536 2539 2542 2545 2548 850 atoms in group subset_O(H2O) group subset_O(H2O) id 2551 2554 2557 2560 2563 2566 2569 2572 2575 2578 860 atoms in group subset_O(H2O) group subset_O(H2O) id 2581 2584 2587 2590 2593 2596 2599 2602 2605 2608 870 atoms in group subset_O(H2O) group subset_O(H2O) id 2611 2614 2617 2620 2623 2626 2629 2632 2635 2638 880 atoms in group subset_O(H2O) group subset_O(H2O) id 2641 2644 2647 2650 2653 2656 2659 2662 2665 2668 890 atoms in group subset_O(H2O) group subset_O(H2O) id 2671 2674 2677 2680 2683 2686 2689 2692 2695 2698 900 atoms in group subset_O(H2O) group subset_O(H2O) id 2701 2704 2707 2710 2713 2716 2719 2722 2725 2728 910 atoms in group subset_O(H2O) group subset_O(H2O) id 2731 2734 2737 2740 2743 2746 2749 2752 2755 2758 920 atoms in group subset_O(H2O) group subset_O(H2O) id 2761 2764 2767 2770 2773 2776 2779 2782 2785 2788 930 atoms in group subset_O(H2O) group subset_O(H2O) id 2791 2794 2797 2800 2803 2806 2809 2812 2815 2818 940 atoms in group subset_O(H2O) group subset_O(H2O) id 2821 2824 2827 2830 2833 2836 2839 2842 2845 2848 950 atoms in group subset_O(H2O) group subset_O(H2O) id 2851 2854 2857 2860 2863 2866 2869 2872 2875 2878 960 atoms in group subset_O(H2O) group subset_O(H2O) id 2881 2884 2887 2890 2893 2896 2899 2902 2905 2908 970 atoms in group subset_O(H2O) group subset_O(H2O) id 2911 2914 2917 2920 2923 2926 2929 2932 2935 2938 980 atoms in group subset_O(H2O) group subset_O(H2O) id 2941 2944 2947 2950 2953 2956 2959 2962 2965 2968 990 atoms in group subset_O(H2O) group subset_O(H2O) id 2971 2974 2977 2980 2983 2986 2989 2992 2995 2998 1000 atoms in group subset_O(H2O) group subset_O(H2O) id 3001 3004 3007 3010 3013 3016 3019 3022 3025 3028 1010 atoms in group subset_O(H2O) group subset_O(H2O) id 3031 3034 3037 3040 3043 3046 3049 3052 3055 3058 1020 atoms in group subset_O(H2O) group subset_O(H2O) id 3061 3064 3067 3070 3073 3076 3079 3082 3085 3088 1030 atoms in group subset_O(H2O) group subset_O(H2O) id 3091 3094 3097 3100 3103 3106 3109 3112 3115 3118 1040 atoms in group subset_O(H2O) group subset_O(H2O) id 3121 3124 3127 3130 3133 3136 3139 3142 3145 3148 1050 atoms in group subset_O(H2O) group subset_O(H2O) id 3151 3154 3157 3160 3163 3166 3169 3172 3175 3178 1060 atoms in group subset_O(H2O) group subset_O(H2O) id 3181 3184 3187 3190 3193 3196 3199 3202 3205 3208 1070 atoms in group subset_O(H2O) group subset_O(H2O) id 3211 3214 3217 3220 3223 3226 3229 3232 3235 3238 1080 atoms in group subset_O(H2O) group subset_O(H2O) id 3241 3244 3247 3250 3253 3256 3259 3262 3265 3268 1090 atoms in group subset_O(H2O) group subset_O(H2O) id 3271 3274 3277 3280 3283 3286 3289 3292 3295 3298 1100 atoms in group subset_O(H2O) group subset_O(H2O) id 3301 3304 3307 3310 3313 3316 3319 3322 3325 3328 1110 atoms in group subset_O(H2O) group subset_O(H2O) id 3331 3334 3337 3340 3343 3346 3349 3352 3355 3358 1120 atoms in group subset_O(H2O) group subset_O(H2O) id 3361 3364 3367 3370 3373 3376 3379 3382 3385 3388 1130 atoms in group subset_O(H2O) group subset_O(H2O) id 3391 3394 3397 3400 3403 3406 3409 3412 3415 3418 1140 atoms in group subset_O(H2O) group subset_O(H2O) id 3421 3424 3427 3430 3433 3436 3439 3442 3445 3448 1150 atoms in group subset_O(H2O) group subset_O(H2O) id 3451 3454 3457 3460 3463 3466 3469 3472 3475 3478 1160 atoms in group subset_O(H2O) group subset_O(H2O) id 3481 3484 3487 3490 3493 3496 3499 3502 3505 3508 1170 atoms in group subset_O(H2O) group subset_O(H2O) id 3511 3514 3517 3520 3523 3526 3529 3532 3535 3538 1180 atoms in group subset_O(H2O) group subset_O(H2O) id 3541 3544 3547 3550 3553 3556 3559 3562 3565 3568 1190 atoms in group subset_O(H2O) group subset_O(H2O) id 3571 3574 3577 3580 3583 3586 3589 3592 3595 3598 1200 atoms in group subset_O(H2O) group subset_O(H2O) id 3601 3604 3607 3610 3613 3616 3619 3622 3625 3628 1210 atoms in group subset_O(H2O) group subset_O(H2O) id 3631 3634 3637 3640 3643 3646 3649 3652 3655 3658 1220 atoms in group subset_O(H2O) group subset_O(H2O) id 3661 3664 3667 3670 3673 3676 3679 3682 3685 3688 1230 atoms in group subset_O(H2O) group subset_O(H2O) id 3691 3694 3697 3700 3703 3706 3709 3712 3715 3718 1240 atoms in group subset_O(H2O) group subset_O(H2O) id 3721 3724 3727 3730 3733 3736 3739 3742 3745 3748 1250 atoms in group subset_O(H2O) group subset_O(H2O) id 3751 3754 3757 3760 3763 3766 3769 3772 3775 3778 1260 atoms in group subset_O(H2O) group subset_O(H2O) id 3781 3784 3787 3790 3793 3796 3799 3802 3805 3808 1270 atoms in group subset_O(H2O) group subset_O(H2O) id 3811 3814 3817 3820 3823 3826 3829 3832 3835 3838 1280 atoms in group subset_O(H2O) group subset_O(H2O) id 3841 3844 3847 3850 3853 3856 3859 3862 3865 3868 1290 atoms in group subset_O(H2O) group subset_O(H2O) id 3871 3874 3877 3880 3883 3886 3889 3892 3895 3898 1300 atoms in group subset_O(H2O) group subset_O(H2O) id 3901 3904 3907 3910 3913 3916 3919 3922 3925 3928 1310 atoms in group subset_O(H2O) group subset_O(H2O) id 3931 3934 3937 3940 3943 3946 3949 3952 3955 3958 1320 atoms in group subset_O(H2O) group subset_O(H2O) id 3961 3964 3967 3970 3973 3976 3979 3982 3985 3988 1330 atoms in group subset_O(H2O) group subset_O(H2O) id 3991 3994 3997 4000 4003 4006 4009 4012 4015 4018 1340 atoms in group subset_O(H2O) group subset_O(H2O) id 4021 4024 4027 4030 4033 4036 4039 4042 4045 4048 1350 atoms in group subset_O(H2O) group subset_O(H2O) id 4051 4054 4057 4060 4063 4066 4069 4072 4075 4078 1360 atoms in group subset_O(H2O) group subset_O(H2O) id 4081 4084 4087 4090 4093 4096 4099 4102 4105 4108 1370 atoms in group subset_O(H2O) group subset_O(H2O) id 4111 4114 4117 4120 4123 4126 4129 4132 4135 4138 1380 atoms in group subset_O(H2O) group subset_O(H2O) id 4141 4144 4147 4150 4153 4156 4159 4162 4165 4168 1390 atoms in group subset_O(H2O) group subset_O(H2O) id 4171 4174 4177 4180 4183 4186 4189 4192 4195 4198 1400 atoms in group subset_O(H2O) group subset_O(H2O) id 4201 4204 4207 4210 4213 4216 4219 4222 4225 4228 1410 atoms in group subset_O(H2O) group subset_O(H2O) id 4231 4234 4237 4240 4243 4246 4249 4252 4255 4258 1420 atoms in group subset_O(H2O) group subset_O(H2O) id 4261 4264 4267 4270 4273 4276 4279 4282 4285 4288 1430 atoms in group subset_O(H2O) group subset_O(H2O) id 4291 4294 4297 4300 4303 4306 4309 4312 4315 4318 1440 atoms in group subset_O(H2O) group subset_O(H2O) id 4321 4324 4327 4330 4333 4336 4339 4342 4345 4348 1450 atoms in group subset_O(H2O) group subset_O(H2O) id 4351 4354 4357 4360 4363 4366 4369 4372 4375 4378 1460 atoms in group subset_O(H2O) group subset_O(H2O) id 4381 4384 4387 4390 4393 4396 4399 4402 4405 4408 1470 atoms in group subset_O(H2O) group subset_O(H2O) id 4411 4414 4417 4420 4423 4426 4429 4432 4435 4438 1480 atoms in group subset_O(H2O) group subset_O(H2O) id 4441 4444 4447 4450 4453 4456 4459 4462 4465 4468 1490 atoms in group subset_O(H2O) group subset_O(H2O) id 4471 4474 4477 4480 4483 4486 4489 4492 4495 4498 1500 atoms in group subset_O(H2O) group subset_O(H2O) id 4501 4504 4507 4510 4513 4516 4519 4522 4525 4528 1510 atoms in group subset_O(H2O) group subset_O(H2O) id 4531 4534 4537 4540 4543 4546 4549 4552 4555 4558 1520 atoms in group subset_O(H2O) group subset_O(H2O) id 4561 4564 4567 4570 4573 4576 4579 4582 4585 4588 1530 atoms in group subset_O(H2O) group subset_O(H2O) id 4591 4594 4597 4600 4603 4606 4609 4612 4615 4618 1540 atoms in group subset_O(H2O) group subset_O(H2O) id 4621 4624 4627 4630 4633 4636 4639 4642 4645 4648 1550 atoms in group subset_O(H2O) group subset_O(H2O) id 4651 4654 4657 4660 4663 4666 4669 4672 4675 4678 1560 atoms in group subset_O(H2O) group subset_O(H2O) id 4681 4684 4687 4690 4693 4696 4699 4702 4705 4708 1570 atoms in group subset_O(H2O) group subset_O(H2O) id 4711 4714 4717 4720 4723 4726 4729 4732 4735 4738 1580 atoms in group subset_O(H2O) group subset_O(H2O) id 4741 4744 4747 4750 4753 4756 4759 4762 4765 4768 1590 atoms in group subset_O(H2O) group subset_O(H2O) id 4771 4774 4777 4780 4783 4786 4789 4792 4795 4798 1600 atoms in group subset_O(H2O) group subset_O(H2O) id 4801 4804 4807 4810 4813 4816 4819 4822 4825 4828 1610 atoms in group subset_O(H2O) group subset_O(H2O) id 4831 4834 4837 4840 4843 4846 4849 4852 4855 4858 1620 atoms in group subset_O(H2O) group subset_O(H2O) id 4861 4864 4867 4870 4873 4876 4879 4882 4885 4888 1630 atoms in group subset_O(H2O) group subset_O(H2O) id 4891 4894 4897 4900 4903 4906 4909 4912 4915 4918 1640 atoms in group subset_O(H2O) group subset_O(H2O) id 4921 4924 4927 4930 4933 4936 4939 4942 4945 4948 1650 atoms in group subset_O(H2O) group subset_O(H2O) id 4951 4954 4957 4960 4963 4966 4969 4972 4975 4978 1660 atoms in group subset_O(H2O) group subset_O(H2O) id 4981 4984 4987 4990 4993 4996 4999 5002 5005 5008 1670 atoms in group subset_O(H2O) group subset_O(H2O) id 5011 5014 5017 5020 5023 5026 5029 5032 5035 5038 1680 atoms in group subset_O(H2O) group subset_O(H2O) id 5041 5044 5047 5050 5053 5056 5059 5062 5065 5068 1690 atoms in group subset_O(H2O) group subset_O(H2O) id 5071 5074 5077 5080 5083 5086 5089 5092 5095 5098 1700 atoms in group subset_O(H2O) group subset_O(H2O) id 5101 5104 5107 5110 5113 5116 5119 5122 5125 5128 1710 atoms in group subset_O(H2O) group subset_O(H2O) id 5131 5134 5137 5140 5143 5146 5149 5152 5155 5158 1720 atoms in group subset_O(H2O) group subset_O(H2O) id 5161 5164 5167 5170 5173 5176 5179 5182 5185 5188 1730 atoms in group subset_O(H2O) group subset_O(H2O) id 5191 5194 5197 5200 5203 5206 5209 5212 5215 5218 1740 atoms in group subset_O(H2O) group subset_O(H2O) id 5221 5224 5227 5230 5233 5236 5239 5242 5245 5248 1750 atoms in group subset_O(H2O) group subset_O(H2O) id 5251 5254 5257 5260 5263 5266 5269 5272 5275 5278 1760 atoms in group subset_O(H2O) group subset_O(H2O) id 5281 5284 5287 5290 5293 5296 5299 5302 5305 5308 1770 atoms in group subset_O(H2O) group subset_O(H2O) id 5311 5314 5317 5320 5323 5326 5329 5332 5335 5338 1780 atoms in group subset_O(H2O) group subset_O(H2O) id 5341 5344 5347 5350 5353 5356 5359 5362 5365 5368 1790 atoms in group subset_O(H2O) group subset_O(H2O) id 5371 5374 5377 5380 5383 5386 5389 5392 5395 5398 1800 atoms in group subset_O(H2O) group subset_O(H2O) id 5401 5404 5407 5410 5413 5416 5419 5422 5425 5428 1810 atoms in group subset_O(H2O) group subset_O(H2O) id 5431 5434 5437 5440 5443 5446 5449 5452 5455 5458 1820 atoms in group subset_O(H2O) group subset_O(H2O) id 5461 5464 5467 5470 5473 5476 5479 5482 5485 5488 1830 atoms in group subset_O(H2O) group subset_O(H2O) id 5491 5494 5497 5500 5503 5506 5509 5512 5515 5518 1840 atoms in group subset_O(H2O) group subset_O(H2O) id 5521 5524 5527 5530 5533 5536 5539 5542 5545 5548 1850 atoms in group subset_O(H2O) group subset_O(H2O) id 5551 5554 5557 5560 5563 5566 5569 5572 5575 5578 1860 atoms in group subset_O(H2O) group subset_O(H2O) id 5581 5584 5587 5590 5593 5596 5599 5602 5605 5608 1870 atoms in group subset_O(H2O) group subset_O(H2O) id 5611 5614 5617 5620 5623 5626 5629 5632 5635 5638 1880 atoms in group subset_O(H2O) group subset_O(H2O) id 5641 5644 5647 5650 5653 5656 5659 5662 5665 5668 1890 atoms in group subset_O(H2O) group subset_O(H2O) id 5671 5674 5677 5680 5683 5686 5689 5692 5695 5698 1900 atoms in group subset_O(H2O) group subset_O(H2O) id 5701 5704 5707 5710 5713 5716 5719 5722 5725 5728 1910 atoms in group subset_O(H2O) group subset_O(H2O) id 5731 5734 5737 5740 5743 5746 5749 5752 5755 5758 1920 atoms in group subset_O(H2O) group subset_O(H2O) id 5761 5764 5767 5770 5773 5776 5779 5782 5785 5788 1930 atoms in group subset_O(H2O) group subset_O(H2O) id 5791 5794 5797 5800 5803 5806 5809 5812 5815 5818 1940 atoms in group subset_O(H2O) group subset_O(H2O) id 5821 5824 5827 5830 5833 5836 5839 5842 5845 5848 1950 atoms in group subset_O(H2O) group subset_O(H2O) id 5851 5854 5857 5860 5863 5866 5869 5872 5875 5878 1960 atoms in group subset_O(H2O) group subset_O(H2O) id 5881 5884 5887 5890 5893 5896 5899 5902 5905 5908 1970 atoms in group subset_O(H2O) group subset_O(H2O) id 5911 5914 5917 5920 5923 5926 5929 5932 5935 5938 1980 atoms in group subset_O(H2O) group subset_O(H2O) id 5941 5944 5947 5950 5953 5956 5959 5962 5965 5968 1990 atoms in group subset_O(H2O) group subset_O(H2O) id 5971 5974 5977 5980 5983 5986 5989 5992 5995 5998 2000 atoms in group subset_O(H2O) group subset_O(H2O) id 6001 6004 6007 6010 6013 6016 6019 6022 6025 6028 2010 atoms in group subset_O(H2O) group subset_O(H2O) id 6031 6034 6037 6040 6043 6046 6049 6052 6055 6058 2020 atoms in group subset_O(H2O) group subset_O(H2O) id 6061 6064 6067 6070 6073 6076 6079 6082 6085 6088 2030 atoms in group subset_O(H2O) group subset_O(H2O) id 6091 6094 6097 6100 6103 6106 6109 6112 6115 6118 2040 atoms in group subset_O(H2O) group subset_O(H2O) id 6121 6124 6127 6130 6133 6136 6139 6142 6145 6148 2050 atoms in group subset_O(H2O) group subset_O(H2O) id 6151 6154 6157 6160 6163 6166 6169 6172 6175 6178 2060 atoms in group subset_O(H2O) group subset_O(H2O) id 6181 6184 6187 6190 6193 6196 6199 6202 6205 6208 2070 atoms in group subset_O(H2O) group subset_O(H2O) id 6211 6214 6217 6220 6223 6226 6229 6232 6235 6238 2080 atoms in group subset_O(H2O) group subset_O(H2O) id 6241 6244 6247 6250 6253 6256 6259 6262 6265 6268 2090 atoms in group subset_O(H2O) group subset_O(H2O) id 6271 6274 6277 6280 6283 6286 6289 6292 6295 6298 2100 atoms in group subset_O(H2O) group subset_O(H2O) id 6301 6304 6307 6310 6313 6316 6319 6322 6325 6328 2110 atoms in group subset_O(H2O) group subset_O(H2O) id 6331 6334 6337 6340 6343 6346 6349 6352 6355 6358 2120 atoms in group subset_O(H2O) group subset_O(H2O) id 6361 6364 6367 6370 6373 6376 6379 6382 6385 6388 2130 atoms in group subset_O(H2O) group subset_O(H2O) id 6391 6394 6397 6400 6403 6406 6409 6412 6415 6418 2140 atoms in group subset_O(H2O) group subset_O(H2O) id 6421 6424 6427 6430 6433 6436 6439 6442 6445 6448 2150 atoms in group subset_O(H2O) group subset_O(H2O) id 6451 6454 6457 6460 6463 6466 6469 6472 6475 6478 2160 atoms in group subset_O(H2O) group subset_O(H2O) id 6481 6484 6487 6490 6493 6496 6499 6502 6505 6508 2170 atoms in group subset_O(H2O) group subset_O(H2O) id 6511 6514 6517 6520 6523 6526 6529 6532 6535 6538 2180 atoms in group subset_O(H2O) group subset_O(H2O) id 6541 6544 6547 6550 6553 6556 6559 6562 6565 6568 2190 atoms in group subset_O(H2O) group subset_O(H2O) id 6571 6574 6577 6580 6583 6586 6589 6592 6595 6598 2200 atoms in group subset_O(H2O) group subset_H(H2O) id 2 3 5 6 8 9 11 12 14 15 10 atoms in group subset_H(H2O) group subset_H(H2O) id 17 18 20 21 23 24 26 27 29 30 20 atoms in group subset_H(H2O) group subset_H(H2O) id 32 33 35 36 38 39 41 42 44 45 30 atoms in group subset_H(H2O) group subset_H(H2O) id 47 48 50 51 53 54 56 57 59 60 40 atoms in group subset_H(H2O) group subset_H(H2O) id 62 63 65 66 68 69 71 72 74 75 50 atoms in group subset_H(H2O) group subset_H(H2O) id 77 78 80 81 83 84 86 87 89 90 60 atoms in group subset_H(H2O) group subset_H(H2O) id 92 93 95 96 98 99 101 102 104 105 70 atoms in group subset_H(H2O) group subset_H(H2O) id 107 108 110 111 113 114 116 117 119 120 80 atoms in group subset_H(H2O) group subset_H(H2O) id 122 123 125 126 128 129 131 132 134 135 90 atoms in group subset_H(H2O) group subset_H(H2O) id 137 138 140 141 143 144 146 147 149 150 100 atoms in group subset_H(H2O) group subset_H(H2O) id 152 153 155 156 158 159 161 162 164 165 110 atoms in group subset_H(H2O) group subset_H(H2O) id 167 168 170 171 173 174 176 177 179 180 120 atoms in group subset_H(H2O) group subset_H(H2O) id 182 183 185 186 188 189 191 192 194 195 130 atoms in group subset_H(H2O) group subset_H(H2O) id 197 198 200 201 203 204 206 207 209 210 140 atoms in group subset_H(H2O) group subset_H(H2O) id 212 213 215 216 218 219 221 222 224 225 150 atoms in group subset_H(H2O) group subset_H(H2O) id 227 228 230 231 233 234 236 237 239 240 160 atoms in group subset_H(H2O) group subset_H(H2O) id 242 243 245 246 248 249 251 252 254 255 170 atoms in group subset_H(H2O) group subset_H(H2O) id 257 258 260 261 263 264 266 267 269 270 180 atoms in group subset_H(H2O) group subset_H(H2O) id 272 273 275 276 278 279 281 282 284 285 190 atoms in group subset_H(H2O) group subset_H(H2O) id 287 288 290 291 293 294 296 297 299 300 200 atoms in group subset_H(H2O) group subset_H(H2O) id 302 303 305 306 308 309 311 312 314 315 210 atoms in group subset_H(H2O) group subset_H(H2O) id 317 318 320 321 323 324 326 327 329 330 220 atoms in group subset_H(H2O) group subset_H(H2O) id 332 333 335 336 338 339 341 342 344 345 230 atoms in group subset_H(H2O) group subset_H(H2O) id 347 348 350 351 353 354 356 357 359 360 240 atoms in group subset_H(H2O) group subset_H(H2O) id 362 363 365 366 368 369 371 372 374 375 250 atoms in group subset_H(H2O) group subset_H(H2O) id 377 378 380 381 383 384 386 387 389 390 260 atoms in group subset_H(H2O) group subset_H(H2O) id 392 393 395 396 398 399 401 402 404 405 270 atoms in group subset_H(H2O) group subset_H(H2O) id 407 408 410 411 413 414 416 417 419 420 280 atoms in group subset_H(H2O) group subset_H(H2O) id 422 423 425 426 428 429 431 432 434 435 290 atoms in group subset_H(H2O) group subset_H(H2O) id 437 438 440 441 443 444 446 447 449 450 300 atoms in group subset_H(H2O) group subset_H(H2O) id 452 453 455 456 458 459 461 462 464 465 310 atoms in group subset_H(H2O) group subset_H(H2O) id 467 468 470 471 473 474 476 477 479 480 320 atoms in group subset_H(H2O) group subset_H(H2O) id 482 483 485 486 488 489 491 492 494 495 330 atoms in group subset_H(H2O) group subset_H(H2O) id 497 498 500 501 503 504 506 507 509 510 340 atoms in group subset_H(H2O) group subset_H(H2O) id 512 513 515 516 518 519 521 522 524 525 350 atoms in group subset_H(H2O) group subset_H(H2O) id 527 528 530 531 533 534 536 537 539 540 360 atoms in group subset_H(H2O) group subset_H(H2O) id 542 543 545 546 548 549 551 552 554 555 370 atoms in group subset_H(H2O) group subset_H(H2O) id 557 558 560 561 563 564 566 567 569 570 380 atoms in group subset_H(H2O) group subset_H(H2O) id 572 573 575 576 578 579 581 582 584 585 390 atoms in group subset_H(H2O) group subset_H(H2O) id 587 588 590 591 593 594 596 597 599 600 400 atoms in group subset_H(H2O) group subset_H(H2O) id 602 603 605 606 608 609 611 612 614 615 410 atoms in group subset_H(H2O) group subset_H(H2O) id 617 618 620 621 623 624 626 627 629 630 420 atoms in group subset_H(H2O) group subset_H(H2O) id 632 633 635 636 638 639 641 642 644 645 430 atoms in group subset_H(H2O) group subset_H(H2O) id 647 648 650 651 653 654 656 657 659 660 440 atoms in group subset_H(H2O) group subset_H(H2O) id 662 663 665 666 668 669 671 672 674 675 450 atoms in group subset_H(H2O) group subset_H(H2O) id 677 678 680 681 683 684 686 687 689 690 460 atoms in group subset_H(H2O) group subset_H(H2O) id 692 693 695 696 698 699 701 702 704 705 470 atoms in group subset_H(H2O) group subset_H(H2O) id 707 708 710 711 713 714 716 717 719 720 480 atoms in group subset_H(H2O) group subset_H(H2O) id 722 723 725 726 728 729 731 732 734 735 490 atoms in group subset_H(H2O) group subset_H(H2O) id 737 738 740 741 743 744 746 747 749 750 500 atoms in group subset_H(H2O) group subset_H(H2O) id 752 753 755 756 758 759 761 762 764 765 510 atoms in group subset_H(H2O) group subset_H(H2O) id 767 768 770 771 773 774 776 777 779 780 520 atoms in group subset_H(H2O) group subset_H(H2O) id 782 783 785 786 788 789 791 792 794 795 530 atoms in group subset_H(H2O) group subset_H(H2O) id 797 798 800 801 803 804 806 807 809 810 540 atoms in group subset_H(H2O) group subset_H(H2O) id 812 813 815 816 818 819 821 822 824 825 550 atoms in group subset_H(H2O) group subset_H(H2O) id 827 828 830 831 833 834 836 837 839 840 560 atoms in group subset_H(H2O) group subset_H(H2O) id 842 843 845 846 848 849 851 852 854 855 570 atoms in group subset_H(H2O) group subset_H(H2O) id 857 858 860 861 863 864 866 867 869 870 580 atoms in group subset_H(H2O) group subset_H(H2O) id 872 873 875 876 878 879 881 882 884 885 590 atoms in group subset_H(H2O) group subset_H(H2O) id 887 888 890 891 893 894 896 897 899 900 600 atoms in group subset_H(H2O) group subset_H(H2O) id 902 903 905 906 908 909 911 912 914 915 610 atoms in group subset_H(H2O) group subset_H(H2O) id 917 918 920 921 923 924 926 927 929 930 620 atoms in group subset_H(H2O) group subset_H(H2O) id 932 933 935 936 938 939 941 942 944 945 630 atoms in group subset_H(H2O) group subset_H(H2O) id 947 948 950 951 953 954 956 957 959 960 640 atoms in group subset_H(H2O) group subset_H(H2O) id 962 963 965 966 968 969 971 972 974 975 650 atoms in group subset_H(H2O) group subset_H(H2O) id 977 978 980 981 983 984 986 987 989 990 660 atoms in group subset_H(H2O) group subset_H(H2O) id 992 993 995 996 998 999 1001 1002 1004 1005 670 atoms in group subset_H(H2O) group subset_H(H2O) id 1007 1008 1010 1011 1013 1014 1016 1017 1019 1020 680 atoms in group subset_H(H2O) group subset_H(H2O) id 1022 1023 1025 1026 1028 1029 1031 1032 1034 1035 690 atoms in group subset_H(H2O) group subset_H(H2O) id 1037 1038 1040 1041 1043 1044 1046 1047 1049 1050 700 atoms in group subset_H(H2O) group subset_H(H2O) id 1052 1053 1055 1056 1058 1059 1061 1062 1064 1065 710 atoms in group subset_H(H2O) group subset_H(H2O) id 1067 1068 1070 1071 1073 1074 1076 1077 1079 1080 720 atoms in group subset_H(H2O) group subset_H(H2O) id 1082 1083 1085 1086 1088 1089 1091 1092 1094 1095 730 atoms in group subset_H(H2O) group subset_H(H2O) id 1097 1098 1100 1101 1103 1104 1106 1107 1109 1110 740 atoms in group subset_H(H2O) group subset_H(H2O) id 1112 1113 1115 1116 1118 1119 1121 1122 1124 1125 750 atoms in group subset_H(H2O) group subset_H(H2O) id 1127 1128 1130 1131 1133 1134 1136 1137 1139 1140 760 atoms in group subset_H(H2O) group subset_H(H2O) id 1142 1143 1145 1146 1148 1149 1151 1152 1154 1155 770 atoms in group subset_H(H2O) group subset_H(H2O) id 1157 1158 1160 1161 1163 1164 1166 1167 1169 1170 780 atoms in group subset_H(H2O) group subset_H(H2O) id 1172 1173 1175 1176 1178 1179 1181 1182 1184 1185 790 atoms in group subset_H(H2O) group subset_H(H2O) id 1187 1188 1190 1191 1193 1194 1196 1197 1199 1200 800 atoms in group subset_H(H2O) group subset_H(H2O) id 1202 1203 1205 1206 1208 1209 1211 1212 1214 1215 810 atoms in group subset_H(H2O) group subset_H(H2O) id 1217 1218 1220 1221 1223 1224 1226 1227 1229 1230 820 atoms in group subset_H(H2O) group subset_H(H2O) id 1232 1233 1235 1236 1238 1239 1241 1242 1244 1245 830 atoms in group subset_H(H2O) group subset_H(H2O) id 1247 1248 1250 1251 1253 1254 1256 1257 1259 1260 840 atoms in group subset_H(H2O) group subset_H(H2O) id 1262 1263 1265 1266 1268 1269 1271 1272 1274 1275 850 atoms in group subset_H(H2O) group subset_H(H2O) id 1277 1278 1280 1281 1283 1284 1286 1287 1289 1290 860 atoms in group subset_H(H2O) group subset_H(H2O) id 1292 1293 1295 1296 1298 1299 1301 1302 1304 1305 870 atoms in group subset_H(H2O) group subset_H(H2O) id 1307 1308 1310 1311 1313 1314 1316 1317 1319 1320 880 atoms in group subset_H(H2O) group subset_H(H2O) id 1322 1323 1325 1326 1328 1329 1331 1332 1334 1335 890 atoms in group subset_H(H2O) group subset_H(H2O) id 1337 1338 1340 1341 1343 1344 1346 1347 1349 1350 900 atoms in group subset_H(H2O) group subset_H(H2O) id 1352 1353 1355 1356 1358 1359 1361 1362 1364 1365 910 atoms in group subset_H(H2O) group subset_H(H2O) id 1367 1368 1370 1371 1373 1374 1376 1377 1379 1380 920 atoms in group subset_H(H2O) group subset_H(H2O) id 1382 1383 1385 1386 1388 1389 1391 1392 1394 1395 930 atoms in group subset_H(H2O) group subset_H(H2O) id 1397 1398 1400 1401 1403 1404 1406 1407 1409 1410 940 atoms in group subset_H(H2O) group subset_H(H2O) id 1412 1413 1415 1416 1418 1419 1421 1422 1424 1425 950 atoms in group subset_H(H2O) group subset_H(H2O) id 1427 1428 1430 1431 1433 1434 1436 1437 1439 1440 960 atoms in group subset_H(H2O) group subset_H(H2O) id 1442 1443 1445 1446 1448 1449 1451 1452 1454 1455 970 atoms in group subset_H(H2O) group subset_H(H2O) id 1457 1458 1460 1461 1463 1464 1466 1467 1469 1470 980 atoms in group subset_H(H2O) group subset_H(H2O) id 1472 1473 1475 1476 1478 1479 1481 1482 1484 1485 990 atoms in group subset_H(H2O) group subset_H(H2O) id 1487 1488 1490 1491 1493 1494 1496 1497 1499 1500 1000 atoms in group subset_H(H2O) group subset_H(H2O) id 1502 1503 1505 1506 1508 1509 1511 1512 1514 1515 1010 atoms in group subset_H(H2O) group subset_H(H2O) id 1517 1518 1520 1521 1523 1524 1526 1527 1529 1530 1020 atoms in group subset_H(H2O) group subset_H(H2O) id 1532 1533 1535 1536 1538 1539 1541 1542 1544 1545 1030 atoms in group subset_H(H2O) group subset_H(H2O) id 1547 1548 1550 1551 1553 1554 1556 1557 1559 1560 1040 atoms in group subset_H(H2O) group subset_H(H2O) id 1562 1563 1565 1566 1568 1569 1571 1572 1574 1575 1050 atoms in group subset_H(H2O) group subset_H(H2O) id 1577 1578 1580 1581 1583 1584 1586 1587 1589 1590 1060 atoms in group subset_H(H2O) group subset_H(H2O) id 1592 1593 1595 1596 1598 1599 1601 1602 1604 1605 1070 atoms in group subset_H(H2O) group subset_H(H2O) id 1607 1608 1610 1611 1613 1614 1616 1617 1619 1620 1080 atoms in group subset_H(H2O) group subset_H(H2O) id 1622 1623 1625 1626 1628 1629 1631 1632 1634 1635 1090 atoms in group subset_H(H2O) group subset_H(H2O) id 1637 1638 1640 1641 1643 1644 1646 1647 1649 1650 1100 atoms in group subset_H(H2O) group subset_H(H2O) id 1652 1653 1655 1656 1658 1659 1661 1662 1664 1665 1110 atoms in group subset_H(H2O) group subset_H(H2O) id 1667 1668 1670 1671 1673 1674 1676 1677 1679 1680 1120 atoms in group subset_H(H2O) group subset_H(H2O) id 1682 1683 1685 1686 1688 1689 1691 1692 1694 1695 1130 atoms in group subset_H(H2O) group subset_H(H2O) id 1697 1698 1700 1701 1703 1704 1706 1707 1709 1710 1140 atoms in group subset_H(H2O) group subset_H(H2O) id 1712 1713 1715 1716 1718 1719 1721 1722 1724 1725 1150 atoms in group subset_H(H2O) group subset_H(H2O) id 1727 1728 1730 1731 1733 1734 1736 1737 1739 1740 1160 atoms in group subset_H(H2O) group subset_H(H2O) id 1742 1743 1745 1746 1748 1749 1751 1752 1754 1755 1170 atoms in group subset_H(H2O) group subset_H(H2O) id 1757 1758 1760 1761 1763 1764 1766 1767 1769 1770 1180 atoms in group subset_H(H2O) group subset_H(H2O) id 1772 1773 1775 1776 1778 1779 1781 1782 1784 1785 1190 atoms in group subset_H(H2O) group subset_H(H2O) id 1787 1788 1790 1791 1793 1794 1796 1797 1799 1800 1200 atoms in group subset_H(H2O) group subset_H(H2O) id 1802 1803 1805 1806 1808 1809 1811 1812 1814 1815 1210 atoms in group subset_H(H2O) group subset_H(H2O) id 1817 1818 1820 1821 1823 1824 1826 1827 1829 1830 1220 atoms in group subset_H(H2O) group subset_H(H2O) id 1832 1833 1835 1836 1838 1839 1841 1842 1844 1845 1230 atoms in group subset_H(H2O) group subset_H(H2O) id 1847 1848 1850 1851 1853 1854 1856 1857 1859 1860 1240 atoms in group subset_H(H2O) group subset_H(H2O) id 1862 1863 1865 1866 1868 1869 1871 1872 1874 1875 1250 atoms in group subset_H(H2O) group subset_H(H2O) id 1877 1878 1880 1881 1883 1884 1886 1887 1889 1890 1260 atoms in group subset_H(H2O) group subset_H(H2O) id 1892 1893 1895 1896 1898 1899 1901 1902 1904 1905 1270 atoms in group subset_H(H2O) group subset_H(H2O) id 1907 1908 1910 1911 1913 1914 1916 1917 1919 1920 1280 atoms in group subset_H(H2O) group subset_H(H2O) id 1922 1923 1925 1926 1928 1929 1931 1932 1934 1935 1290 atoms in group subset_H(H2O) group subset_H(H2O) id 1937 1938 1940 1941 1943 1944 1946 1947 1949 1950 1300 atoms in group subset_H(H2O) group subset_H(H2O) id 1952 1953 1955 1956 1958 1959 1961 1962 1964 1965 1310 atoms in group subset_H(H2O) group subset_H(H2O) id 1967 1968 1970 1971 1973 1974 1976 1977 1979 1980 1320 atoms in group subset_H(H2O) group subset_H(H2O) id 1982 1983 1985 1986 1988 1989 1991 1992 1994 1995 1330 atoms in group subset_H(H2O) group subset_H(H2O) id 1997 1998 2000 2001 2003 2004 2006 2007 2009 2010 1340 atoms in group subset_H(H2O) group subset_H(H2O) id 2012 2013 2015 2016 2018 2019 2021 2022 2024 2025 1350 atoms in group subset_H(H2O) group subset_H(H2O) id 2027 2028 2030 2031 2033 2034 2036 2037 2039 2040 1360 atoms in group subset_H(H2O) group subset_H(H2O) id 2042 2043 2045 2046 2048 2049 2051 2052 2054 2055 1370 atoms in group subset_H(H2O) group subset_H(H2O) id 2057 2058 2060 2061 2063 2064 2066 2067 2069 2070 1380 atoms in group subset_H(H2O) group subset_H(H2O) id 2072 2073 2075 2076 2078 2079 2081 2082 2084 2085 1390 atoms in group subset_H(H2O) group subset_H(H2O) id 2087 2088 2090 2091 2093 2094 2096 2097 2099 2100 1400 atoms in group subset_H(H2O) group subset_H(H2O) id 2102 2103 2105 2106 2108 2109 2111 2112 2114 2115 1410 atoms in group subset_H(H2O) group subset_H(H2O) id 2117 2118 2120 2121 2123 2124 2126 2127 2129 2130 1420 atoms in group subset_H(H2O) group subset_H(H2O) id 2132 2133 2135 2136 2138 2139 2141 2142 2144 2145 1430 atoms in group subset_H(H2O) group subset_H(H2O) id 2147 2148 2150 2151 2153 2154 2156 2157 2159 2160 1440 atoms in group subset_H(H2O) group subset_H(H2O) id 2162 2163 2165 2166 2168 2169 2171 2172 2174 2175 1450 atoms in group subset_H(H2O) group subset_H(H2O) id 2177 2178 2180 2181 2183 2184 2186 2187 2189 2190 1460 atoms in group subset_H(H2O) group subset_H(H2O) id 2192 2193 2195 2196 2198 2199 2201 2202 2204 2205 1470 atoms in group subset_H(H2O) group subset_H(H2O) id 2207 2208 2210 2211 2213 2214 2216 2217 2219 2220 1480 atoms in group subset_H(H2O) group subset_H(H2O) id 2222 2223 2225 2226 2228 2229 2231 2232 2234 2235 1490 atoms in group subset_H(H2O) group subset_H(H2O) id 2237 2238 2240 2241 2243 2244 2246 2247 2249 2250 1500 atoms in group subset_H(H2O) group subset_H(H2O) id 2252 2253 2255 2256 2258 2259 2261 2262 2264 2265 1510 atoms in group subset_H(H2O) group subset_H(H2O) id 2267 2268 2270 2271 2273 2274 2276 2277 2279 2280 1520 atoms in group subset_H(H2O) group subset_H(H2O) id 2282 2283 2285 2286 2288 2289 2291 2292 2294 2295 1530 atoms in group subset_H(H2O) group subset_H(H2O) id 2297 2298 2300 2301 2303 2304 2306 2307 2309 2310 1540 atoms in group subset_H(H2O) group subset_H(H2O) id 2312 2313 2315 2316 2318 2319 2321 2322 2324 2325 1550 atoms in group subset_H(H2O) group subset_H(H2O) id 2327 2328 2330 2331 2333 2334 2336 2337 2339 2340 1560 atoms in group subset_H(H2O) group subset_H(H2O) id 2342 2343 2345 2346 2348 2349 2351 2352 2354 2355 1570 atoms in group subset_H(H2O) group subset_H(H2O) id 2357 2358 2360 2361 2363 2364 2366 2367 2369 2370 1580 atoms in group subset_H(H2O) group subset_H(H2O) id 2372 2373 2375 2376 2378 2379 2381 2382 2384 2385 1590 atoms in group subset_H(H2O) group subset_H(H2O) id 2387 2388 2390 2391 2393 2394 2396 2397 2399 2400 1600 atoms in group subset_H(H2O) group subset_H(H2O) id 2402 2403 2405 2406 2408 2409 2411 2412 2414 2415 1610 atoms in group subset_H(H2O) group subset_H(H2O) id 2417 2418 2420 2421 2423 2424 2426 2427 2429 2430 1620 atoms in group subset_H(H2O) group subset_H(H2O) id 2432 2433 2435 2436 2438 2439 2441 2442 2444 2445 1630 atoms in group subset_H(H2O) group subset_H(H2O) id 2447 2448 2450 2451 2453 2454 2456 2457 2459 2460 1640 atoms in group subset_H(H2O) group subset_H(H2O) id 2462 2463 2465 2466 2468 2469 2471 2472 2474 2475 1650 atoms in group subset_H(H2O) group subset_H(H2O) id 2477 2478 2480 2481 2483 2484 2486 2487 2489 2490 1660 atoms in group subset_H(H2O) group subset_H(H2O) id 2492 2493 2495 2496 2498 2499 2501 2502 2504 2505 1670 atoms in group subset_H(H2O) group subset_H(H2O) id 2507 2508 2510 2511 2513 2514 2516 2517 2519 2520 1680 atoms in group subset_H(H2O) group subset_H(H2O) id 2522 2523 2525 2526 2528 2529 2531 2532 2534 2535 1690 atoms in group subset_H(H2O) group subset_H(H2O) id 2537 2538 2540 2541 2543 2544 2546 2547 2549 2550 1700 atoms in group subset_H(H2O) group subset_H(H2O) id 2552 2553 2555 2556 2558 2559 2561 2562 2564 2565 1710 atoms in group subset_H(H2O) group subset_H(H2O) id 2567 2568 2570 2571 2573 2574 2576 2577 2579 2580 1720 atoms in group subset_H(H2O) group subset_H(H2O) id 2582 2583 2585 2586 2588 2589 2591 2592 2594 2595 1730 atoms in group subset_H(H2O) group subset_H(H2O) id 2597 2598 2600 2601 2603 2604 2606 2607 2609 2610 1740 atoms in group subset_H(H2O) group subset_H(H2O) id 2612 2613 2615 2616 2618 2619 2621 2622 2624 2625 1750 atoms in group subset_H(H2O) group subset_H(H2O) id 2627 2628 2630 2631 2633 2634 2636 2637 2639 2640 1760 atoms in group subset_H(H2O) group subset_H(H2O) id 2642 2643 2645 2646 2648 2649 2651 2652 2654 2655 1770 atoms in group subset_H(H2O) group subset_H(H2O) id 2657 2658 2660 2661 2663 2664 2666 2667 2669 2670 1780 atoms in group subset_H(H2O) group subset_H(H2O) id 2672 2673 2675 2676 2678 2679 2681 2682 2684 2685 1790 atoms in group subset_H(H2O) group subset_H(H2O) id 2687 2688 2690 2691 2693 2694 2696 2697 2699 2700 1800 atoms in group subset_H(H2O) group subset_H(H2O) id 2702 2703 2705 2706 2708 2709 2711 2712 2714 2715 1810 atoms in group subset_H(H2O) group subset_H(H2O) id 2717 2718 2720 2721 2723 2724 2726 2727 2729 2730 1820 atoms in group subset_H(H2O) group subset_H(H2O) id 2732 2733 2735 2736 2738 2739 2741 2742 2744 2745 1830 atoms in group subset_H(H2O) group subset_H(H2O) id 2747 2748 2750 2751 2753 2754 2756 2757 2759 2760 1840 atoms in group subset_H(H2O) group subset_H(H2O) id 2762 2763 2765 2766 2768 2769 2771 2772 2774 2775 1850 atoms in group subset_H(H2O) group subset_H(H2O) id 2777 2778 2780 2781 2783 2784 2786 2787 2789 2790 1860 atoms in group subset_H(H2O) group subset_H(H2O) id 2792 2793 2795 2796 2798 2799 2801 2802 2804 2805 1870 atoms in group subset_H(H2O) group subset_H(H2O) id 2807 2808 2810 2811 2813 2814 2816 2817 2819 2820 1880 atoms in group subset_H(H2O) group subset_H(H2O) id 2822 2823 2825 2826 2828 2829 2831 2832 2834 2835 1890 atoms in group subset_H(H2O) group subset_H(H2O) id 2837 2838 2840 2841 2843 2844 2846 2847 2849 2850 1900 atoms in group subset_H(H2O) group subset_H(H2O) id 2852 2853 2855 2856 2858 2859 2861 2862 2864 2865 1910 atoms in group subset_H(H2O) group subset_H(H2O) id 2867 2868 2870 2871 2873 2874 2876 2877 2879 2880 1920 atoms in group subset_H(H2O) group subset_H(H2O) id 2882 2883 2885 2886 2888 2889 2891 2892 2894 2895 1930 atoms in group subset_H(H2O) group subset_H(H2O) id 2897 2898 2900 2901 2903 2904 2906 2907 2909 2910 1940 atoms in group subset_H(H2O) group subset_H(H2O) id 2912 2913 2915 2916 2918 2919 2921 2922 2924 2925 1950 atoms in group subset_H(H2O) group subset_H(H2O) id 2927 2928 2930 2931 2933 2934 2936 2937 2939 2940 1960 atoms in group subset_H(H2O) group subset_H(H2O) id 2942 2943 2945 2946 2948 2949 2951 2952 2954 2955 1970 atoms in group subset_H(H2O) group subset_H(H2O) id 2957 2958 2960 2961 2963 2964 2966 2967 2969 2970 1980 atoms in group subset_H(H2O) group subset_H(H2O) id 2972 2973 2975 2976 2978 2979 2981 2982 2984 2985 1990 atoms in group subset_H(H2O) group subset_H(H2O) id 2987 2988 2990 2991 2993 2994 2996 2997 2999 3000 2000 atoms in group subset_H(H2O) group subset_H(H2O) id 3002 3003 3005 3006 3008 3009 3011 3012 3014 3015 2010 atoms in group subset_H(H2O) group subset_H(H2O) id 3017 3018 3020 3021 3023 3024 3026 3027 3029 3030 2020 atoms in group subset_H(H2O) group subset_H(H2O) id 3032 3033 3035 3036 3038 3039 3041 3042 3044 3045 2030 atoms in group subset_H(H2O) group subset_H(H2O) id 3047 3048 3050 3051 3053 3054 3056 3057 3059 3060 2040 atoms in group subset_H(H2O) group subset_H(H2O) id 3062 3063 3065 3066 3068 3069 3071 3072 3074 3075 2050 atoms in group subset_H(H2O) group subset_H(H2O) id 3077 3078 3080 3081 3083 3084 3086 3087 3089 3090 2060 atoms in group subset_H(H2O) group subset_H(H2O) id 3092 3093 3095 3096 3098 3099 3101 3102 3104 3105 2070 atoms in group subset_H(H2O) group subset_H(H2O) id 3107 3108 3110 3111 3113 3114 3116 3117 3119 3120 2080 atoms in group subset_H(H2O) group subset_H(H2O) id 3122 3123 3125 3126 3128 3129 3131 3132 3134 3135 2090 atoms in group subset_H(H2O) group subset_H(H2O) id 3137 3138 3140 3141 3143 3144 3146 3147 3149 3150 2100 atoms in group subset_H(H2O) group subset_H(H2O) id 3152 3153 3155 3156 3158 3159 3161 3162 3164 3165 2110 atoms in group subset_H(H2O) group subset_H(H2O) id 3167 3168 3170 3171 3173 3174 3176 3177 3179 3180 2120 atoms in group subset_H(H2O) group subset_H(H2O) id 3182 3183 3185 3186 3188 3189 3191 3192 3194 3195 2130 atoms in group subset_H(H2O) group subset_H(H2O) id 3197 3198 3200 3201 3203 3204 3206 3207 3209 3210 2140 atoms in group subset_H(H2O) group subset_H(H2O) id 3212 3213 3215 3216 3218 3219 3221 3222 3224 3225 2150 atoms in group subset_H(H2O) group subset_H(H2O) id 3227 3228 3230 3231 3233 3234 3236 3237 3239 3240 2160 atoms in group subset_H(H2O) group subset_H(H2O) id 3242 3243 3245 3246 3248 3249 3251 3252 3254 3255 2170 atoms in group subset_H(H2O) group subset_H(H2O) id 3257 3258 3260 3261 3263 3264 3266 3267 3269 3270 2180 atoms in group subset_H(H2O) group subset_H(H2O) id 3272 3273 3275 3276 3278 3279 3281 3282 3284 3285 2190 atoms in group subset_H(H2O) group subset_H(H2O) id 3287 3288 3290 3291 3293 3294 3296 3297 3299 3300 2200 atoms in group subset_H(H2O) group subset_H(H2O) id 3302 3303 3305 3306 3308 3309 3311 3312 3314 3315 2210 atoms in group subset_H(H2O) group subset_H(H2O) id 3317 3318 3320 3321 3323 3324 3326 3327 3329 3330 2220 atoms in group subset_H(H2O) group subset_H(H2O) id 3332 3333 3335 3336 3338 3339 3341 3342 3344 3345 2230 atoms in group subset_H(H2O) group subset_H(H2O) id 3347 3348 3350 3351 3353 3354 3356 3357 3359 3360 2240 atoms in group subset_H(H2O) group subset_H(H2O) id 3362 3363 3365 3366 3368 3369 3371 3372 3374 3375 2250 atoms in group subset_H(H2O) group subset_H(H2O) id 3377 3378 3380 3381 3383 3384 3386 3387 3389 3390 2260 atoms in group subset_H(H2O) group subset_H(H2O) id 3392 3393 3395 3396 3398 3399 3401 3402 3404 3405 2270 atoms in group subset_H(H2O) group subset_H(H2O) id 3407 3408 3410 3411 3413 3414 3416 3417 3419 3420 2280 atoms in group subset_H(H2O) group subset_H(H2O) id 3422 3423 3425 3426 3428 3429 3431 3432 3434 3435 2290 atoms in group subset_H(H2O) group subset_H(H2O) id 3437 3438 3440 3441 3443 3444 3446 3447 3449 3450 2300 atoms in group subset_H(H2O) group subset_H(H2O) id 3452 3453 3455 3456 3458 3459 3461 3462 3464 3465 2310 atoms in group subset_H(H2O) group subset_H(H2O) id 3467 3468 3470 3471 3473 3474 3476 3477 3479 3480 2320 atoms in group subset_H(H2O) group subset_H(H2O) id 3482 3483 3485 3486 3488 3489 3491 3492 3494 3495 2330 atoms in group subset_H(H2O) group subset_H(H2O) id 3497 3498 3500 3501 3503 3504 3506 3507 3509 3510 2340 atoms in group subset_H(H2O) group subset_H(H2O) id 3512 3513 3515 3516 3518 3519 3521 3522 3524 3525 2350 atoms in group subset_H(H2O) group subset_H(H2O) id 3527 3528 3530 3531 3533 3534 3536 3537 3539 3540 2360 atoms in group subset_H(H2O) group subset_H(H2O) id 3542 3543 3545 3546 3548 3549 3551 3552 3554 3555 2370 atoms in group subset_H(H2O) group subset_H(H2O) id 3557 3558 3560 3561 3563 3564 3566 3567 3569 3570 2380 atoms in group subset_H(H2O) group subset_H(H2O) id 3572 3573 3575 3576 3578 3579 3581 3582 3584 3585 2390 atoms in group subset_H(H2O) group subset_H(H2O) id 3587 3588 3590 3591 3593 3594 3596 3597 3599 3600 2400 atoms in group subset_H(H2O) group subset_H(H2O) id 3602 3603 3605 3606 3608 3609 3611 3612 3614 3615 2410 atoms in group subset_H(H2O) group subset_H(H2O) id 3617 3618 3620 3621 3623 3624 3626 3627 3629 3630 2420 atoms in group subset_H(H2O) group subset_H(H2O) id 3632 3633 3635 3636 3638 3639 3641 3642 3644 3645 2430 atoms in group subset_H(H2O) group subset_H(H2O) id 3647 3648 3650 3651 3653 3654 3656 3657 3659 3660 2440 atoms in group subset_H(H2O) group subset_H(H2O) id 3662 3663 3665 3666 3668 3669 3671 3672 3674 3675 2450 atoms in group subset_H(H2O) group subset_H(H2O) id 3677 3678 3680 3681 3683 3684 3686 3687 3689 3690 2460 atoms in group subset_H(H2O) group subset_H(H2O) id 3692 3693 3695 3696 3698 3699 3701 3702 3704 3705 2470 atoms in group subset_H(H2O) group subset_H(H2O) id 3707 3708 3710 3711 3713 3714 3716 3717 3719 3720 2480 atoms in group subset_H(H2O) group subset_H(H2O) id 3722 3723 3725 3726 3728 3729 3731 3732 3734 3735 2490 atoms in group subset_H(H2O) group subset_H(H2O) id 3737 3738 3740 3741 3743 3744 3746 3747 3749 3750 2500 atoms in group subset_H(H2O) group subset_H(H2O) id 3752 3753 3755 3756 3758 3759 3761 3762 3764 3765 2510 atoms in group subset_H(H2O) group subset_H(H2O) id 3767 3768 3770 3771 3773 3774 3776 3777 3779 3780 2520 atoms in group subset_H(H2O) group subset_H(H2O) id 3782 3783 3785 3786 3788 3789 3791 3792 3794 3795 2530 atoms in group subset_H(H2O) group subset_H(H2O) id 3797 3798 3800 3801 3803 3804 3806 3807 3809 3810 2540 atoms in group subset_H(H2O) group subset_H(H2O) id 3812 3813 3815 3816 3818 3819 3821 3822 3824 3825 2550 atoms in group subset_H(H2O) group subset_H(H2O) id 3827 3828 3830 3831 3833 3834 3836 3837 3839 3840 2560 atoms in group subset_H(H2O) group subset_H(H2O) id 3842 3843 3845 3846 3848 3849 3851 3852 3854 3855 2570 atoms in group subset_H(H2O) group subset_H(H2O) id 3857 3858 3860 3861 3863 3864 3866 3867 3869 3870 2580 atoms in group subset_H(H2O) group subset_H(H2O) id 3872 3873 3875 3876 3878 3879 3881 3882 3884 3885 2590 atoms in group subset_H(H2O) group subset_H(H2O) id 3887 3888 3890 3891 3893 3894 3896 3897 3899 3900 2600 atoms in group subset_H(H2O) group subset_H(H2O) id 3902 3903 3905 3906 3908 3909 3911 3912 3914 3915 2610 atoms in group subset_H(H2O) group subset_H(H2O) id 3917 3918 3920 3921 3923 3924 3926 3927 3929 3930 2620 atoms in group subset_H(H2O) group subset_H(H2O) id 3932 3933 3935 3936 3938 3939 3941 3942 3944 3945 2630 atoms in group subset_H(H2O) group subset_H(H2O) id 3947 3948 3950 3951 3953 3954 3956 3957 3959 3960 2640 atoms in group subset_H(H2O) group subset_H(H2O) id 3962 3963 3965 3966 3968 3969 3971 3972 3974 3975 2650 atoms in group subset_H(H2O) group subset_H(H2O) id 3977 3978 3980 3981 3983 3984 3986 3987 3989 3990 2660 atoms in group subset_H(H2O) group subset_H(H2O) id 3992 3993 3995 3996 3998 3999 4001 4002 4004 4005 2670 atoms in group subset_H(H2O) group subset_H(H2O) id 4007 4008 4010 4011 4013 4014 4016 4017 4019 4020 2680 atoms in group subset_H(H2O) group subset_H(H2O) id 4022 4023 4025 4026 4028 4029 4031 4032 4034 4035 2690 atoms in group subset_H(H2O) group subset_H(H2O) id 4037 4038 4040 4041 4043 4044 4046 4047 4049 4050 2700 atoms in group subset_H(H2O) group subset_H(H2O) id 4052 4053 4055 4056 4058 4059 4061 4062 4064 4065 2710 atoms in group subset_H(H2O) group subset_H(H2O) id 4067 4068 4070 4071 4073 4074 4076 4077 4079 4080 2720 atoms in group subset_H(H2O) group subset_H(H2O) id 4082 4083 4085 4086 4088 4089 4091 4092 4094 4095 2730 atoms in group subset_H(H2O) group subset_H(H2O) id 4097 4098 4100 4101 4103 4104 4106 4107 4109 4110 2740 atoms in group subset_H(H2O) group subset_H(H2O) id 4112 4113 4115 4116 4118 4119 4121 4122 4124 4125 2750 atoms in group subset_H(H2O) group subset_H(H2O) id 4127 4128 4130 4131 4133 4134 4136 4137 4139 4140 2760 atoms in group subset_H(H2O) group subset_H(H2O) id 4142 4143 4145 4146 4148 4149 4151 4152 4154 4155 2770 atoms in group subset_H(H2O) group subset_H(H2O) id 4157 4158 4160 4161 4163 4164 4166 4167 4169 4170 2780 atoms in group subset_H(H2O) group subset_H(H2O) id 4172 4173 4175 4176 4178 4179 4181 4182 4184 4185 2790 atoms in group subset_H(H2O) group subset_H(H2O) id 4187 4188 4190 4191 4193 4194 4196 4197 4199 4200 2800 atoms in group subset_H(H2O) group subset_H(H2O) id 4202 4203 4205 4206 4208 4209 4211 4212 4214 4215 2810 atoms in group subset_H(H2O) group subset_H(H2O) id 4217 4218 4220 4221 4223 4224 4226 4227 4229 4230 2820 atoms in group subset_H(H2O) group subset_H(H2O) id 4232 4233 4235 4236 4238 4239 4241 4242 4244 4245 2830 atoms in group subset_H(H2O) group subset_H(H2O) id 4247 4248 4250 4251 4253 4254 4256 4257 4259 4260 2840 atoms in group subset_H(H2O) group subset_H(H2O) id 4262 4263 4265 4266 4268 4269 4271 4272 4274 4275 2850 atoms in group subset_H(H2O) group subset_H(H2O) id 4277 4278 4280 4281 4283 4284 4286 4287 4289 4290 2860 atoms in group subset_H(H2O) group subset_H(H2O) id 4292 4293 4295 4296 4298 4299 4301 4302 4304 4305 2870 atoms in group subset_H(H2O) group subset_H(H2O) id 4307 4308 4310 4311 4313 4314 4316 4317 4319 4320 2880 atoms in group subset_H(H2O) group subset_H(H2O) id 4322 4323 4325 4326 4328 4329 4331 4332 4334 4335 2890 atoms in group subset_H(H2O) group subset_H(H2O) id 4337 4338 4340 4341 4343 4344 4346 4347 4349 4350 2900 atoms in group subset_H(H2O) group subset_H(H2O) id 4352 4353 4355 4356 4358 4359 4361 4362 4364 4365 2910 atoms in group subset_H(H2O) group subset_H(H2O) id 4367 4368 4370 4371 4373 4374 4376 4377 4379 4380 2920 atoms in group subset_H(H2O) group subset_H(H2O) id 4382 4383 4385 4386 4388 4389 4391 4392 4394 4395 2930 atoms in group subset_H(H2O) group subset_H(H2O) id 4397 4398 4400 4401 4403 4404 4406 4407 4409 4410 2940 atoms in group subset_H(H2O) group subset_H(H2O) id 4412 4413 4415 4416 4418 4419 4421 4422 4424 4425 2950 atoms in group subset_H(H2O) group subset_H(H2O) id 4427 4428 4430 4431 4433 4434 4436 4437 4439 4440 2960 atoms in group subset_H(H2O) group subset_H(H2O) id 4442 4443 4445 4446 4448 4449 4451 4452 4454 4455 2970 atoms in group subset_H(H2O) group subset_H(H2O) id 4457 4458 4460 4461 4463 4464 4466 4467 4469 4470 2980 atoms in group subset_H(H2O) group subset_H(H2O) id 4472 4473 4475 4476 4478 4479 4481 4482 4484 4485 2990 atoms in group subset_H(H2O) group subset_H(H2O) id 4487 4488 4490 4491 4493 4494 4496 4497 4499 4500 3000 atoms in group subset_H(H2O) group subset_H(H2O) id 4502 4503 4505 4506 4508 4509 4511 4512 4514 4515 3010 atoms in group subset_H(H2O) group subset_H(H2O) id 4517 4518 4520 4521 4523 4524 4526 4527 4529 4530 3020 atoms in group subset_H(H2O) group subset_H(H2O) id 4532 4533 4535 4536 4538 4539 4541 4542 4544 4545 3030 atoms in group subset_H(H2O) group subset_H(H2O) id 4547 4548 4550 4551 4553 4554 4556 4557 4559 4560 3040 atoms in group subset_H(H2O) group subset_H(H2O) id 4562 4563 4565 4566 4568 4569 4571 4572 4574 4575 3050 atoms in group subset_H(H2O) group subset_H(H2O) id 4577 4578 4580 4581 4583 4584 4586 4587 4589 4590 3060 atoms in group subset_H(H2O) group subset_H(H2O) id 4592 4593 4595 4596 4598 4599 4601 4602 4604 4605 3070 atoms in group subset_H(H2O) group subset_H(H2O) id 4607 4608 4610 4611 4613 4614 4616 4617 4619 4620 3080 atoms in group subset_H(H2O) group subset_H(H2O) id 4622 4623 4625 4626 4628 4629 4631 4632 4634 4635 3090 atoms in group subset_H(H2O) group subset_H(H2O) id 4637 4638 4640 4641 4643 4644 4646 4647 4649 4650 3100 atoms in group subset_H(H2O) group subset_H(H2O) id 4652 4653 4655 4656 4658 4659 4661 4662 4664 4665 3110 atoms in group subset_H(H2O) group subset_H(H2O) id 4667 4668 4670 4671 4673 4674 4676 4677 4679 4680 3120 atoms in group subset_H(H2O) group subset_H(H2O) id 4682 4683 4685 4686 4688 4689 4691 4692 4694 4695 3130 atoms in group subset_H(H2O) group subset_H(H2O) id 4697 4698 4700 4701 4703 4704 4706 4707 4709 4710 3140 atoms in group subset_H(H2O) group subset_H(H2O) id 4712 4713 4715 4716 4718 4719 4721 4722 4724 4725 3150 atoms in group subset_H(H2O) group subset_H(H2O) id 4727 4728 4730 4731 4733 4734 4736 4737 4739 4740 3160 atoms in group subset_H(H2O) group subset_H(H2O) id 4742 4743 4745 4746 4748 4749 4751 4752 4754 4755 3170 atoms in group subset_H(H2O) group subset_H(H2O) id 4757 4758 4760 4761 4763 4764 4766 4767 4769 4770 3180 atoms in group subset_H(H2O) group subset_H(H2O) id 4772 4773 4775 4776 4778 4779 4781 4782 4784 4785 3190 atoms in group subset_H(H2O) group subset_H(H2O) id 4787 4788 4790 4791 4793 4794 4796 4797 4799 4800 3200 atoms in group subset_H(H2O) group subset_H(H2O) id 4802 4803 4805 4806 4808 4809 4811 4812 4814 4815 3210 atoms in group subset_H(H2O) group subset_H(H2O) id 4817 4818 4820 4821 4823 4824 4826 4827 4829 4830 3220 atoms in group subset_H(H2O) group subset_H(H2O) id 4832 4833 4835 4836 4838 4839 4841 4842 4844 4845 3230 atoms in group subset_H(H2O) group subset_H(H2O) id 4847 4848 4850 4851 4853 4854 4856 4857 4859 4860 3240 atoms in group subset_H(H2O) group subset_H(H2O) id 4862 4863 4865 4866 4868 4869 4871 4872 4874 4875 3250 atoms in group subset_H(H2O) group subset_H(H2O) id 4877 4878 4880 4881 4883 4884 4886 4887 4889 4890 3260 atoms in group subset_H(H2O) group subset_H(H2O) id 4892 4893 4895 4896 4898 4899 4901 4902 4904 4905 3270 atoms in group subset_H(H2O) group subset_H(H2O) id 4907 4908 4910 4911 4913 4914 4916 4917 4919 4920 3280 atoms in group subset_H(H2O) group subset_H(H2O) id 4922 4923 4925 4926 4928 4929 4931 4932 4934 4935 3290 atoms in group subset_H(H2O) group subset_H(H2O) id 4937 4938 4940 4941 4943 4944 4946 4947 4949 4950 3300 atoms in group subset_H(H2O) group subset_H(H2O) id 4952 4953 4955 4956 4958 4959 4961 4962 4964 4965 3310 atoms in group subset_H(H2O) group subset_H(H2O) id 4967 4968 4970 4971 4973 4974 4976 4977 4979 4980 3320 atoms in group subset_H(H2O) group subset_H(H2O) id 4982 4983 4985 4986 4988 4989 4991 4992 4994 4995 3330 atoms in group subset_H(H2O) group subset_H(H2O) id 4997 4998 5000 5001 5003 5004 5006 5007 5009 5010 3340 atoms in group subset_H(H2O) group subset_H(H2O) id 5012 5013 5015 5016 5018 5019 5021 5022 5024 5025 3350 atoms in group subset_H(H2O) group subset_H(H2O) id 5027 5028 5030 5031 5033 5034 5036 5037 5039 5040 3360 atoms in group subset_H(H2O) group subset_H(H2O) id 5042 5043 5045 5046 5048 5049 5051 5052 5054 5055 3370 atoms in group subset_H(H2O) group subset_H(H2O) id 5057 5058 5060 5061 5063 5064 5066 5067 5069 5070 3380 atoms in group subset_H(H2O) group subset_H(H2O) id 5072 5073 5075 5076 5078 5079 5081 5082 5084 5085 3390 atoms in group subset_H(H2O) group subset_H(H2O) id 5087 5088 5090 5091 5093 5094 5096 5097 5099 5100 3400 atoms in group subset_H(H2O) group subset_H(H2O) id 5102 5103 5105 5106 5108 5109 5111 5112 5114 5115 3410 atoms in group subset_H(H2O) group subset_H(H2O) id 5117 5118 5120 5121 5123 5124 5126 5127 5129 5130 3420 atoms in group subset_H(H2O) group subset_H(H2O) id 5132 5133 5135 5136 5138 5139 5141 5142 5144 5145 3430 atoms in group subset_H(H2O) group subset_H(H2O) id 5147 5148 5150 5151 5153 5154 5156 5157 5159 5160 3440 atoms in group subset_H(H2O) group subset_H(H2O) id 5162 5163 5165 5166 5168 5169 5171 5172 5174 5175 3450 atoms in group subset_H(H2O) group subset_H(H2O) id 5177 5178 5180 5181 5183 5184 5186 5187 5189 5190 3460 atoms in group subset_H(H2O) group subset_H(H2O) id 5192 5193 5195 5196 5198 5199 5201 5202 5204 5205 3470 atoms in group subset_H(H2O) group subset_H(H2O) id 5207 5208 5210 5211 5213 5214 5216 5217 5219 5220 3480 atoms in group subset_H(H2O) group subset_H(H2O) id 5222 5223 5225 5226 5228 5229 5231 5232 5234 5235 3490 atoms in group subset_H(H2O) group subset_H(H2O) id 5237 5238 5240 5241 5243 5244 5246 5247 5249 5250 3500 atoms in group subset_H(H2O) group subset_H(H2O) id 5252 5253 5255 5256 5258 5259 5261 5262 5264 5265 3510 atoms in group subset_H(H2O) group subset_H(H2O) id 5267 5268 5270 5271 5273 5274 5276 5277 5279 5280 3520 atoms in group subset_H(H2O) group subset_H(H2O) id 5282 5283 5285 5286 5288 5289 5291 5292 5294 5295 3530 atoms in group subset_H(H2O) group subset_H(H2O) id 5297 5298 5300 5301 5303 5304 5306 5307 5309 5310 3540 atoms in group subset_H(H2O) group subset_H(H2O) id 5312 5313 5315 5316 5318 5319 5321 5322 5324 5325 3550 atoms in group subset_H(H2O) group subset_H(H2O) id 5327 5328 5330 5331 5333 5334 5336 5337 5339 5340 3560 atoms in group subset_H(H2O) group subset_H(H2O) id 5342 5343 5345 5346 5348 5349 5351 5352 5354 5355 3570 atoms in group subset_H(H2O) group subset_H(H2O) id 5357 5358 5360 5361 5363 5364 5366 5367 5369 5370 3580 atoms in group subset_H(H2O) group subset_H(H2O) id 5372 5373 5375 5376 5378 5379 5381 5382 5384 5385 3590 atoms in group subset_H(H2O) group subset_H(H2O) id 5387 5388 5390 5391 5393 5394 5396 5397 5399 5400 3600 atoms in group subset_H(H2O) group subset_H(H2O) id 5402 5403 5405 5406 5408 5409 5411 5412 5414 5415 3610 atoms in group subset_H(H2O) group subset_H(H2O) id 5417 5418 5420 5421 5423 5424 5426 5427 5429 5430 3620 atoms in group subset_H(H2O) group subset_H(H2O) id 5432 5433 5435 5436 5438 5439 5441 5442 5444 5445 3630 atoms in group subset_H(H2O) group subset_H(H2O) id 5447 5448 5450 5451 5453 5454 5456 5457 5459 5460 3640 atoms in group subset_H(H2O) group subset_H(H2O) id 5462 5463 5465 5466 5468 5469 5471 5472 5474 5475 3650 atoms in group subset_H(H2O) group subset_H(H2O) id 5477 5478 5480 5481 5483 5484 5486 5487 5489 5490 3660 atoms in group subset_H(H2O) group subset_H(H2O) id 5492 5493 5495 5496 5498 5499 5501 5502 5504 5505 3670 atoms in group subset_H(H2O) group subset_H(H2O) id 5507 5508 5510 5511 5513 5514 5516 5517 5519 5520 3680 atoms in group subset_H(H2O) group subset_H(H2O) id 5522 5523 5525 5526 5528 5529 5531 5532 5534 5535 3690 atoms in group subset_H(H2O) group subset_H(H2O) id 5537 5538 5540 5541 5543 5544 5546 5547 5549 5550 3700 atoms in group subset_H(H2O) group subset_H(H2O) id 5552 5553 5555 5556 5558 5559 5561 5562 5564 5565 3710 atoms in group subset_H(H2O) group subset_H(H2O) id 5567 5568 5570 5571 5573 5574 5576 5577 5579 5580 3720 atoms in group subset_H(H2O) group subset_H(H2O) id 5582 5583 5585 5586 5588 5589 5591 5592 5594 5595 3730 atoms in group subset_H(H2O) group subset_H(H2O) id 5597 5598 5600 5601 5603 5604 5606 5607 5609 5610 3740 atoms in group subset_H(H2O) group subset_H(H2O) id 5612 5613 5615 5616 5618 5619 5621 5622 5624 5625 3750 atoms in group subset_H(H2O) group subset_H(H2O) id 5627 5628 5630 5631 5633 5634 5636 5637 5639 5640 3760 atoms in group subset_H(H2O) group subset_H(H2O) id 5642 5643 5645 5646 5648 5649 5651 5652 5654 5655 3770 atoms in group subset_H(H2O) group subset_H(H2O) id 5657 5658 5660 5661 5663 5664 5666 5667 5669 5670 3780 atoms in group subset_H(H2O) group subset_H(H2O) id 5672 5673 5675 5676 5678 5679 5681 5682 5684 5685 3790 atoms in group subset_H(H2O) group subset_H(H2O) id 5687 5688 5690 5691 5693 5694 5696 5697 5699 5700 3800 atoms in group subset_H(H2O) group subset_H(H2O) id 5702 5703 5705 5706 5708 5709 5711 5712 5714 5715 3810 atoms in group subset_H(H2O) group subset_H(H2O) id 5717 5718 5720 5721 5723 5724 5726 5727 5729 5730 3820 atoms in group subset_H(H2O) group subset_H(H2O) id 5732 5733 5735 5736 5738 5739 5741 5742 5744 5745 3830 atoms in group subset_H(H2O) group subset_H(H2O) id 5747 5748 5750 5751 5753 5754 5756 5757 5759 5760 3840 atoms in group subset_H(H2O) group subset_H(H2O) id 5762 5763 5765 5766 5768 5769 5771 5772 5774 5775 3850 atoms in group subset_H(H2O) group subset_H(H2O) id 5777 5778 5780 5781 5783 5784 5786 5787 5789 5790 3860 atoms in group subset_H(H2O) group subset_H(H2O) id 5792 5793 5795 5796 5798 5799 5801 5802 5804 5805 3870 atoms in group subset_H(H2O) group subset_H(H2O) id 5807 5808 5810 5811 5813 5814 5816 5817 5819 5820 3880 atoms in group subset_H(H2O) group subset_H(H2O) id 5822 5823 5825 5826 5828 5829 5831 5832 5834 5835 3890 atoms in group subset_H(H2O) group subset_H(H2O) id 5837 5838 5840 5841 5843 5844 5846 5847 5849 5850 3900 atoms in group subset_H(H2O) group subset_H(H2O) id 5852 5853 5855 5856 5858 5859 5861 5862 5864 5865 3910 atoms in group subset_H(H2O) group subset_H(H2O) id 5867 5868 5870 5871 5873 5874 5876 5877 5879 5880 3920 atoms in group subset_H(H2O) group subset_H(H2O) id 5882 5883 5885 5886 5888 5889 5891 5892 5894 5895 3930 atoms in group subset_H(H2O) group subset_H(H2O) id 5897 5898 5900 5901 5903 5904 5906 5907 5909 5910 3940 atoms in group subset_H(H2O) group subset_H(H2O) id 5912 5913 5915 5916 5918 5919 5921 5922 5924 5925 3950 atoms in group subset_H(H2O) group subset_H(H2O) id 5927 5928 5930 5931 5933 5934 5936 5937 5939 5940 3960 atoms in group subset_H(H2O) group subset_H(H2O) id 5942 5943 5945 5946 5948 5949 5951 5952 5954 5955 3970 atoms in group subset_H(H2O) group subset_H(H2O) id 5957 5958 5960 5961 5963 5964 5966 5967 5969 5970 3980 atoms in group subset_H(H2O) group subset_H(H2O) id 5972 5973 5975 5976 5978 5979 5981 5982 5984 5985 3990 atoms in group subset_H(H2O) group subset_H(H2O) id 5987 5988 5990 5991 5993 5994 5996 5997 5999 6000 4000 atoms in group subset_H(H2O) group subset_H(H2O) id 6002 6003 6005 6006 6008 6009 6011 6012 6014 6015 4010 atoms in group subset_H(H2O) group subset_H(H2O) id 6017 6018 6020 6021 6023 6024 6026 6027 6029 6030 4020 atoms in group subset_H(H2O) group subset_H(H2O) id 6032 6033 6035 6036 6038 6039 6041 6042 6044 6045 4030 atoms in group subset_H(H2O) group subset_H(H2O) id 6047 6048 6050 6051 6053 6054 6056 6057 6059 6060 4040 atoms in group subset_H(H2O) group subset_H(H2O) id 6062 6063 6065 6066 6068 6069 6071 6072 6074 6075 4050 atoms in group subset_H(H2O) group subset_H(H2O) id 6077 6078 6080 6081 6083 6084 6086 6087 6089 6090 4060 atoms in group subset_H(H2O) group subset_H(H2O) id 6092 6093 6095 6096 6098 6099 6101 6102 6104 6105 4070 atoms in group subset_H(H2O) group subset_H(H2O) id 6107 6108 6110 6111 6113 6114 6116 6117 6119 6120 4080 atoms in group subset_H(H2O) group subset_H(H2O) id 6122 6123 6125 6126 6128 6129 6131 6132 6134 6135 4090 atoms in group subset_H(H2O) group subset_H(H2O) id 6137 6138 6140 6141 6143 6144 6146 6147 6149 6150 4100 atoms in group subset_H(H2O) group subset_H(H2O) id 6152 6153 6155 6156 6158 6159 6161 6162 6164 6165 4110 atoms in group subset_H(H2O) group subset_H(H2O) id 6167 6168 6170 6171 6173 6174 6176 6177 6179 6180 4120 atoms in group subset_H(H2O) group subset_H(H2O) id 6182 6183 6185 6186 6188 6189 6191 6192 6194 6195 4130 atoms in group subset_H(H2O) group subset_H(H2O) id 6197 6198 6200 6201 6203 6204 6206 6207 6209 6210 4140 atoms in group subset_H(H2O) group subset_H(H2O) id 6212 6213 6215 6216 6218 6219 6221 6222 6224 6225 4150 atoms in group subset_H(H2O) group subset_H(H2O) id 6227 6228 6230 6231 6233 6234 6236 6237 6239 6240 4160 atoms in group subset_H(H2O) group subset_H(H2O) id 6242 6243 6245 6246 6248 6249 6251 6252 6254 6255 4170 atoms in group subset_H(H2O) group subset_H(H2O) id 6257 6258 6260 6261 6263 6264 6266 6267 6269 6270 4180 atoms in group subset_H(H2O) group subset_H(H2O) id 6272 6273 6275 6276 6278 6279 6281 6282 6284 6285 4190 atoms in group subset_H(H2O) group subset_H(H2O) id 6287 6288 6290 6291 6293 6294 6296 6297 6299 6300 4200 atoms in group subset_H(H2O) group subset_H(H2O) id 6302 6303 6305 6306 6308 6309 6311 6312 6314 6315 4210 atoms in group subset_H(H2O) group subset_H(H2O) id 6317 6318 6320 6321 6323 6324 6326 6327 6329 6330 4220 atoms in group subset_H(H2O) group subset_H(H2O) id 6332 6333 6335 6336 6338 6339 6341 6342 6344 6345 4230 atoms in group subset_H(H2O) group subset_H(H2O) id 6347 6348 6350 6351 6353 6354 6356 6357 6359 6360 4240 atoms in group subset_H(H2O) group subset_H(H2O) id 6362 6363 6365 6366 6368 6369 6371 6372 6374 6375 4250 atoms in group subset_H(H2O) group subset_H(H2O) id 6377 6378 6380 6381 6383 6384 6386 6387 6389 6390 4260 atoms in group subset_H(H2O) group subset_H(H2O) id 6392 6393 6395 6396 6398 6399 6401 6402 6404 6405 4270 atoms in group subset_H(H2O) group subset_H(H2O) id 6407 6408 6410 6411 6413 6414 6416 6417 6419 6420 4280 atoms in group subset_H(H2O) group subset_H(H2O) id 6422 6423 6425 6426 6428 6429 6431 6432 6434 6435 4290 atoms in group subset_H(H2O) group subset_H(H2O) id 6437 6438 6440 6441 6443 6444 6446 6447 6449 6450 4300 atoms in group subset_H(H2O) group subset_H(H2O) id 6452 6453 6455 6456 6458 6459 6461 6462 6464 6465 4310 atoms in group subset_H(H2O) group subset_H(H2O) id 6467 6468 6470 6471 6473 6474 6476 6477 6479 6480 4320 atoms in group subset_H(H2O) group subset_H(H2O) id 6482 6483 6485 6486 6488 6489 6491 6492 6494 6495 4330 atoms in group subset_H(H2O) group subset_H(H2O) id 6497 6498 6500 6501 6503 6504 6506 6507 6509 6510 4340 atoms in group subset_H(H2O) group subset_H(H2O) id 6512 6513 6515 6516 6518 6519 6521 6522 6524 6525 4350 atoms in group subset_H(H2O) group subset_H(H2O) id 6527 6528 6530 6531 6533 6534 6536 6537 6539 6540 4360 atoms in group subset_H(H2O) group subset_H(H2O) id 6542 6543 6545 6546 6548 6549 6551 6552 6554 6555 4370 atoms in group subset_H(H2O) group subset_H(H2O) id 6557 6558 6560 6561 6563 6564 6566 6567 6569 6570 4380 atoms in group subset_H(H2O) group subset_H(H2O) id 6572 6573 6575 6576 6578 6579 6581 6582 6584 6585 4390 atoms in group subset_H(H2O) group subset_H(H2O) id 6587 6588 6590 6591 6593 6594 6596 6597 6599 6600 4400 atoms in group subset_H(H2O) log 2.2_CompressLayer.out #------------------------------------------------------------------------------- # Stage 2.2: Compress Layer #------------------------------------------------------------------------------- min_style cg min_modify dmax 0.1 line fast reset_timestep 0 displace_atoms all move 0.0 0.0 -0.24716176154885616 Displacing atoms ... # 1. Variable Indenter Stage, minimization to compress initial cell #------------------------------------------------------------------ variable lowz equal zlo print "INITIAL zlow=${lowz}" INITIAL zlow=0.767657941551144 variable highz equal zhi print "INITIAL zhigh=${highz}" INITIAL zhigh=39.6464015353511 run 0 WARNING: No fixes with time integration, atoms won't move (../verlet.cpp:60) generated 0 of 1 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 0 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 14 ghost atom cutoff = 14 binsize = 7, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair lj/class2/coul/cut, perpetual attributes: half, newton on pair build: half/bin/newton stencil: half/bin/3d bin: standard Setting up Verlet run ... Unit style : real Current step : 0 Time step : 1 WARNING: Inconsistent image flags (../domain.cpp:814) Per MPI rank memory allocation (min/avg/max) = 8.393 | 8.778 | 9.163 Mbytes Step v_time Press Volume v_sysdensity Temp E_bond E_angle E_dihed E_impro E_vdwl E_coul E_tail E_long PotEng KinEng 0 1e-06 19349248 63500.506 1.0364237 0 12754.578 1675.4358 0 0 5988340.4 -6705.3397 0 0 5996065.1 0 Loop time of 3.84313e-06 on 8 procs for 0 steps with 6600 atoms 100.8% CPU use with 8 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 0 | 0 | 0 | 0.0 | 0.00 Bond | 0 | 0 | 0 | 0.0 | 0.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0 | 0 | 0 | 0.0 | 0.00 Output | 0 | 0 | 0 | 0.0 | 0.00 Modify | 0 | 0 | 0 | 0.0 | 0.00 Other | | 3.843e-06 | | |100.00 Nlocal: 825 ave 881 max 774 min Histogram: 1 2 0 0 2 0 1 0 0 2 Nghost: 7579.75 ave 7789 max 7397 min Histogram: 1 3 0 0 0 0 0 2 1 1 Neighs: 447864 ave 549575 max 342578 min Histogram: 1 2 1 0 0 0 0 1 1 2 Total # of neighbors = 3582916 Ave neighs/atom = 542.86606 Ave special neighs/atom = 2 Neighbor list builds = 0 Dangerous builds = 0 print "BEFORE MINIMIZE WITH VARIABLE INDENTER" BEFORE MINIMIZE WITH VARIABLE INDENTER print "zlow=${lowz}" zlow=0.767657941551144 print "zhigh=${highz}" zhigh=39.6464015353511 # Minimization stage to push all atoms above max or below min inwards fix upper all indent 10.0 plane z 39.64251465295834 hi units box fix lower all indent 10.0 plane z 0.77154568590021699 lo units box thermo_style custom step fnorm vol v_sysdensity zlo zhi WARNING: New thermo_style command, previous thermo_modify settings will be lost (../output.cpp:888) thermo 50 minimize 0.0 1.0 5000 10000 generated 0 of 1 mixed pair_coeff terms from geometric mixing rule Setting up cg style minimization ... Unit style : real Current step : 0 WARNING: Inconsistent image flags (../domain.cpp:814) Per MPI rank memory allocation (min/avg/max) = 9.518 | 9.903 | 10.29 Mbytes Step Fnorm Volume v_sysdensity Zlo Zhi 0 1.2933143e+08 63500.506 1.0364237 0.76765794 39.646402 11 82729.273 64730.169 1.0167351 0.72768591 40.359301 Loop time of 1.2734 on 8 procs for 11 steps with 6600 atoms 99.0% CPU use with 8 MPI tasks x 1 OpenMP threads Minimization stats: Stopping criterion = linesearch alpha is zero Energy initial, next-to-last, final = 5996065.07494453 2790.31852773137 1388.63968597071 Force two-norm initial, final = 1.2933143e+08 82729.273 Force max component initial, final = 90793276 48614.135 Final line search alpha, max atom move = 5.1481591e-06 0.2502733 Iterations, force evaluations = 11 92 MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 0.73765 | 0.95646 | 1.181 | 17.3 | 75.11 Bond | 0.0031998 | 0.0034673 | 0.003909 | 0.4 | 0.27 Neigh | 0.062014 | 0.062057 | 0.062111 | 0.0 | 4.87 Comm | 0.020767 | 0.24597 | 0.46469 | 34.2 | 19.32 Output | 0 | 0 | 0 | 0.0 | 0.00 Modify | 0.00029066 | 0.00033466 | 0.00037972 | 0.0 | 0.03 Other | | 0.005109 | | | 0.40 Nlocal: 825 ave 898 max 760 min Histogram: 2 1 0 1 0 0 2 0 0 2 Nghost: 7584.62 ave 7863 max 7326 min Histogram: 2 2 0 0 0 0 0 1 1 2 Neighs: 447752 ave 560710 max 335078 min Histogram: 1 3 0 0 0 0 0 1 1 2 Total # of neighbors = 3582014 Ave neighs/atom = 542.72939 Ave special neighs/atom = 2 Neighbor list builds = 4 Dangerous builds = 1 unfix upper unfix lower print "AFTER MINIMIZE WITH VARIABLE INDENTER..." AFTER MINIMIZE WITH VARIABLE INDENTER... print "zlow=${lowz}" zlow=0.727685909348623 print "zhigh=${highz}" zhigh=40.3593012334731 # 2. Fixed Indenter Stage with NVT dynamics to compress initial cell #------------------------------------------------------------------- reset_timestep 0 velocity all create 298.2 72489 dist gaussian mom yes rot no # Fix shake is needed for water in pcff+ fix shaken all shake .0001 20 50000 a 1 b 1 Finding SHAKE clusters ... 0 = # of size 2 clusters 0 = # of size 3 clusters 0 = # of size 4 clusters 2200 = # of frozen angles find clusters CPU = 0.000 seconds variable zhigh equal "39.64251465295834 - elapsed * 0.000002228454" variable zlow equal "0.77154568590021699 + elapsed * 0.000002228454" fix upper all indent 10.0 plane z v_zhigh hi units box fix lower all indent 10.0 plane z v_zlow lo units box thermo_style custom step v_time press vol v_sysdensity temp evdwl ecoul pe ke v_zlow v_zhigh zlo zhi thermo 10000 fix movable1 movable nve fix movable2 movable temp/rescale 20 298.2 298.2 10 1.0 timestep 1 run 1000000 generated 0 of 1 mixed pair_coeff terms from geometric mixing rule Setting up Verlet run ... Unit style : real Current step : 0 Time step : 1 SHAKE stats (type/ave/delta/count) on step 0 1 0.988402 1.07338 6600 1 100.174 68.6113 2200 Per MPI rank memory allocation (min/avg/max) = 9.268 | 9.654 | 10.04 Mbytes Step v_time Press Volume v_sysdensity Temp E_vdwl E_coul PotEng KinEng v_zlow v_zhigh Zlo Zhi 0 1e-06 -2.6851045e+217 64639.7 1.0181581 447.33389 11063.823 -14199.116 -3135.2932 5865.703 0.77154569 39.642515 0.7514913 40.327716 ERROR: Domain too large for neighbor bins (../nbin_standard.cpp:133) Last command: run 1000000 ***** Error running LAMMPS parallel with Intel MPI #!/bin/bash cd "/home/medea/MD/TaskServer/Tasks/localhost-32000-task00764" export PATH="/home/medea/MD/Linux-x86_64/IntelMPI5/bin:$PATH" export LD_LIBRARY_PATH="/home/medea/MD/Linux-x86_64/IntelMPI5/lib:/home/medea/MD/TaskServer/Tools/LAMMPS7Jan22/Linux-x86_64:/home/medea/MD/Linux-x86_64:$LD_LIBRARY_PATH" export PLUMED_KERNEL="/home/medea/MD/TaskServer/Tools/LAMMPS7Jan22/Linux-x86_64/libplumedKernel.so" "/home/medea/MD/Linux-x86_64/IntelMPI5/bin/mpirun" -np 8 "/home/medea/MD/TaskServer/Tools/LAMMPS7Jan22/Linux-x86_64/LAMMPS" -in input.dat child process exited abnormally *****