[Fri May 03 16:13:04 CST 2024] [MD] [warn] 'Starting MedeA Core 3.6.0' Forcefield set to: pcff+ File: Local::/home/medea/MD/Jobs/dir500/770/pcff+.frc md5 sum: 271FB553B535FE0449E31A6F8A0898D3 MedeA version 3.6.0 #------------------------------------------------------------------------------- # This calculation has 2 stages #------------------------------------------------------------------------------- Stage 1: Variables tstep = 1 fs T = 298.2 K Stage 2: This LAMMPS calculation has 3 stages: Stage 2.1: Initialize LAMMPS for a Class 2 type of forcefield 'pcff+' (from Local::/home/medea/MD/Jobs/dir500/770/pcff+.frc) Current system formula: O2200H4400 (OH2) The nonbond terms are handled with a simple cutoff at 12 Angstrom. The long-range van der Waals interactions are included via tail corrections. LAMMPS initialized for layer perpendicular to Z. Stage 2.2: Compress Layer using conjugate gradients and linesearch fast Target thickness: To final density of 0.997047 Relative energy convergence: 0.0 Force convergence: 1.0 Maximum atomic motion: 0.1 Maximum number of iterations: 5000 Maximum number of force evaluations: 10000 Equilibration for 100 ps with a timestep of 1 fs at temperature 298.2 K Stage 2.3: Surface tension calculation using NVT integration for 100 ps with a timestep of 1 fs, T is 298.2 K #------------------------------------------------------------------------------- # Running the calculation #------------------------------------------------------------------------------- Stage 1: Variables tstep = 1 fs T = 298.2 K Stage 2: This LAMMPS calculation has 3 stages: Stage 2.1: Initialize LAMMPS for a Class 2 type of forcefield 'pcff+' (from Local::/home/medea/MD/Jobs/dir500/770/pcff+.frc) Current system formula: O2200H4400 (OH2) The nonbond terms are handled with a simple cutoff at 12 Angstrom. The long-range van der Waals interactions are included via tail corrections. LAMMPS initialized for layer perpendicular to Z. Stage 2.2: Compress Layer using conjugate gradients and linesearch fast Target thickness: To final density of 0.997047 Relative energy convergence: 0.0 Force convergence: 1.0 Maximum atomic motion: 0.1 Maximum number of iterations: 5000 Maximum number of force evaluations: 10000 Equilibration for 100 ps with a timestep of 1 fs at temperature 298.2 K The minimization finished after 5000 steps ending because the max iterations The final density is 0.9970, with a thickness 41.2551 Angstroms Stage 2.3: Surface tension calculation using NVT integration for 100 ps with a timestep of 1 fs, T is 298.2 K Property Value +/- Uncertainty Units After Steps % Run ------------------ ---------- ----------- ------------- ------------ ------- t: 100000 fs T: 297.9 +/- 1.5 K 0 0.0% P: -530 +/- 170 atm 0 0.0% V: 69480 +/- 340 Ang^3 2000 20.0% rho: 0.9475 +/- 0.0046 g/mL 2000 20.0% Etotal: -86700 +/- 2300 kJ/mol 0 0.0% Epot: -103100 +/- 2300 kJ/mol 0 0.0% Ekin: 16342 +/- 81 kJ/mol 0 0.0% Evdw: 25156 +/- 73 kJ/mol 0 0.0% Ecoul: -128200 +/- 2200 kJ/mol 0 0.0% Sxx: 800 +/- 250 atm 0 0.0% Syy: 790 +/- 360 atm 0 0.0% Szz: 1 +/- 11 atm 0 0.0% Syz: 1.9 +/- 9.8 atm 0 0.0% Sxz: -3.8 +/- 9.4 atm 0 0.0% Sxy: -90 +/- 160 atm 0 0.0% Surface_Tension: 173 +/- 54 mN/m 0 0.0% Surface Tension Note: the surface tension calculation assumes that the slab model is oriented perpendicularly to the z simulation direction. For the current system the z direction is 44.64 Angstroms (and the x and y directions are 40 and 40 Angstroms respectively). LAMMPS stage successfully completed on 8 core(s) on Fri 03 May 2024 at 16:53:49 CST after 2437 s (0:40:37) Entire job completed on Fri 03 May 2024 at 16:53:49 CST after 2437 s (0:40:37) and running 1 tasks.