[Fri May 03 17:59:57 CST 2024] [MD] [warn] 'Starting MedeA Core 3.6.0' Forcefield set to: pcff+ File: Local::/home/medea/MD/Jobs/dir500/772/pcff+.frc md5 sum: 271FB553B535FE0449E31A6F8A0898D3 MedeA version 3.6.0 #------------------------------------------------------------------------------- # This calculation has 2 stages #------------------------------------------------------------------------------- Stage 1: Variables tstep = 1 fs T = 298.2 K Stage 2: This LAMMPS calculation has 3 stages: Stage 2.1: Initialize LAMMPS for a Class 2 type of forcefield 'pcff+' (from Local::/home/medea/MD/Jobs/dir500/772/pcff+.frc) Current system formula: O2200H4400 (OH2) The nonbond terms are handled with a cutoff at 12 Angstrom. The long-range Coulomb interactions are handled with the pppm method to a precision of 0.00001. The long-range van der Waals interactions are included via tail corrections. Stage 2.2: Set the velocities for 298.2 K Stage 2.3: Surface tension calculation using NVT integration for 100 ps with a timestep of 1 fs, T is 298.2 K #------------------------------------------------------------------------------- # Running the calculation #------------------------------------------------------------------------------- Stage 1: Variables tstep = 1 fs T = 298.2 K Stage 2: This LAMMPS calculation has 3 stages: Stage 2.1: Initialize LAMMPS for a Class 2 type of forcefield 'pcff+' (from Local::/home/medea/MD/Jobs/dir500/772/pcff+.frc) Current system formula: O2200H4400 (OH2) The nonbond terms are handled with a cutoff at 12 Angstrom. The long-range Coulomb interactions are handled with the pppm method to a precision of 0.00001. The long-range van der Waals interactions are included via tail corrections. Stage 2.2: Set the velocities for 298.2 K Stage 2.3: Surface tension calculation using NVT integration for 100 ps with a timestep of 1 fs, T is 298.2 K Property Value +/- Uncertainty Units After Steps % Run ------------------ ---------- ----------- ------------- ------------ ------- t: 100000 fs T: 297.93 +/- 0.62 K 0 0.0% P: -95.1 +/- 5.7 atm 0 0.0% V: 201600 +/- 0 Ang^3 0 0.0% rho: 0.326456 +/- 0 g/mL 0 0.0% Etotal: -80290 +/- 100 kJ/mol 0 0.0% Epot: -96631 +/- 70 kJ/mol 0 0.0% Ekin: 16345 +/- 34 kJ/mol 0 0.0% Evdw: 23389 +/- 33 kJ/mol 0 0.0% Ecoul: -120020 +/- 89 kJ/mol 0 0.0% Sxx: 134.4 +/- 8.9 atm 0 0.0% Syy: 121.9 +/- 8.4 atm 0 0.0% Szz: 29 +/- 5.5 atm 0 0.0% Syz: -0.1 +/- 3.9 atm 0 0.0% Sxz: -0.4 +/- 3.2 atm 0 0.0% Sxy: -0.1 +/- 4.7 atm 0 0.0% Surface_Tension: 63.3 +/- 4.8 mN/m 0 0.0% Surface Tension Note: the surface tension calculation assumes that the slab model is oriented perpendicularly to the z simulation direction. For the current system the z direction is 126 Angstroms (and the x and y directions are 40 and 40 Angstroms respectively). LAMMPS stage successfully completed on 8 core(s) on Fri 03 May 2024 at 19:10:16 CST after 4212 s (1:10:12) Entire job completed on Fri 03 May 2024 at 19:10:16 CST after 4212 s (1:10:12) and running 1 tasks.